RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 HEXDCQ8WVB3 486 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ADAD1Q96M93 576 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 BTBD9Q96Q07 612 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 COPS8Q99627 209 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 SLC39A3Q9BRY0 314 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 DPH7Q9BTV6 452 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 RSPO3Q9BXY4 272 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 UGT2B28Q9BY64 529 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ADAP2Q9NPF8 381 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PDP1Q9P0J1 537 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 PPP4R1LQ9P1A2 415 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 MYOTQ9UBF9 498 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 RNF115Q9Y4L5 304 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 NINQ8N4C6 2090 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DNAH3Q8TD57 4116 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 LOC285095A0A1B0GVY8 99 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 ANKRD62A6NC57 917 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 H7BY64 318 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 SGK494L7N484 410 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 BUD23O43709 281 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 GNA14O95837 355 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 P04436 131 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CALB1P05937 261 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 HPNP05981 417 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CRHP06850 196 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CMA1P23946 247 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 GGT5P36269 586 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 NR4A2P43354 598 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 IFI35P80217 286 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 GGTLC2Q14390 218 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TERF2Q15554 542 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DNAJC21Q5F1R6 531 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 STEAP3Q658P3 488 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 ZNF425Q6IV72 752 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DNAJC24Q6P3W2 148 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 VWA1Q6PCB0 445 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 QSOX2Q6ZRP7 698 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PDSS2Q86YH6 399 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DCUN1D3Q8IWE4 304 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PPIL6Q8IXY8 311 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 SNX31Q8N9S9 440 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 MCOLN3Q8TDD5 553 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PCDHB18PQ96TA0 734 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TUBA1CQ9BQE3 449 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TRIM2Q9C040 744 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 OPN3Q9H1Y3 402 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 UBQLN3Q9H347 655 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 LIN28AQ9H9Z2 209 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 HACD3Q9P035 362 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CIDEBQ9UHD4 219 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TRHDEQ9UKU6 1024 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 BOKQ9UMX3 212 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 MAPRE3Q9UPY8 281 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 COA3Q9Y2R0 106 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 PKP3Q9Y446 797 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 IKBKGQ9Y6K9 419 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 GOLGA6L4A6NEF3 574 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 GOLGA6L9A6NEM1 432 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 EIF3FO00303 357 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 SMAD9O15198 467 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 RDH16O75452 317 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 ZFAND5O76080 213 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 C1QAP02745 245 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 FHP07954 510 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CYP4B1P13584 511 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CPN1P15169 458 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 ZNF23P17027 643 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 IL1RNP18510 177 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 TBXA2RP21731 343 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 IL1R2P27930 398 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 NSFP46459 744 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 UBA52P62987 128 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 PLOD1Q02809 727 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 PPIDQ08752 370 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 SCGB2A2Q13296 93 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PAFAH1B3Q15102 231 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 SLC35F1Q5T1Q4 408 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 NCMAPQ5T1S8 102 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 NCBP2-AS2Q69YL0 99 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CCBE1Q6UXH8 406 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 CLEC17AQ6ZS10 378 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 RINLQ6ZS11 566 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 RHOUQ7L0Q8 258 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 GLT6D1Q7Z4J2 308 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CLDN19Q8N6F1 224 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 SPATA22Q8NHS9 363 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 PAQR8Q8TEZ7 354 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 HSPH1Q92598 858 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DVL3Q92997 716 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 RERGQ96A58 199 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 ULK4Q96C45 1275 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 RBMXL1Q96E39 390 aaKnown RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 PGM2Q96G03 612 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 VMP1Q96GC9 406 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 DHTKD1Q96HY7 919 aaPredicted RBP2.92□□□□□ -1.94
PMS1-215ENST00000447232 LYSTQ99698 3801 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 NTMT1Q9BV86 223 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 CACNG6Q9BXT2 260 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 SLC25A51Q9H1U9 297 aa2.92□□□□□ -1.94
PMS1-215ENST00000447232 ACSS1Q9NUB1 689 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms