RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 DKK3Q9UBP4 350 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 HCN2Q9UL51 889 aa18.13■□□□□ 0.49
SDCBP-204ENST00000447182 WWP2O00308 870 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 MYL12BO14950 172 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 LILRB5O75023 590 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 CTSLP07711 333 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 MMP12P39900 470 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 GSTM5P46439 218 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 KCNJ5P48544 419 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 BNC1Q01954 994 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF805Q5CZA5 627 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 LIPKQ5VXJ0 399 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 TNFAIP8L2Q6P589 184 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-204ENST00000447182 CD300LDQ6UXZ3 194 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 CFAP206Q8IYR0 622 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF557Q8N988 423 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-204ENST00000447182 ZNF740Q8NDX6 193 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 PXYLP1Q8TE99 480 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 CREB3L4Q8TEY5 395 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 RASSF5Q8WWW0 418 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 POLDIP3Q9BY77 421 aaKnown RBP18.12■□□□□ 0.49
SDCBP-204ENST00000447182 TMEM245Q9H330 911 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 NEUROD4Q9HD90 331 aa18.12■□□□□ 0.49
SDCBP-204ENST00000447182 TXNL4BQ9NX01 149 aaKnown RBP18.12■□□□□ 0.49
SDCBP-204ENST00000447182 ANKRD34BA5PLL1 514 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 CPEP16870 476 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 RPS26P62854 115 aaKnown RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 TMIGD1Q6UXZ0 262 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 CCDC149Q6ZUS6 474 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 GDPD1Q8N9F7 314 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 SIMC1Q8NDZ2 872 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 HCAR2Q8TDS4 363 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 SLAMF7Q9NQ25 335 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 TIGARQ9NQ88 270 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 AHSPQ9NZD4 102 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 CCL26Q9Y258 94 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 MMP20O60882 483 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 CDRT1O95170 752 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 LRG1P02750 347 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 ELFN1P0C7U0 828 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 AZGP1P25311 298 aaKnown RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 HOXD10P28358 340 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 CCL23P55773 120 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 MRPS15P82914 257 aaKnown RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 COX10Q12887 443 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 TBRG1Q3YBR2 411 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 TMEM215Q68D42 235 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 HSDL2Q6YN16 418 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 RDH10Q8IZV5 341 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 SLC7A13Q8TCU3 470 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 GDF15Q99988 308 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 SORBS1Q9BX66 1292 aaKnown RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 MIXL1Q9H2W2 232 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 MARCH7Q9H992 704 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 HMX1Q9NP08 348 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 TESQ9UGI8 421 aaKnown RBP18.11■□□□□ 0.49
SDCBP-204ENST00000447182 SNX7Q9UNH6 387 aa18.11■□□□□ 0.49
SDCBP-204ENST00000447182 ANKDD1BA6NHY2 528 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 PI15O43692 258 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 RAB36O95755 333 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 MSL3P1P0C860 447 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 CXCR2P25025 360 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 PAQR6Q6TCH4 344 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 FAM131AQ6UXB0 335 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 DEF8Q6ZN54 512 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 OR4D11Q8NGI4 311 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 OR52I1Q8NGK6 324 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 MYLIPQ8WY64 445 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 KIAA1143Q96AT1 154 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 MED18Q9BUE0 208 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 ABCB9Q9NP78 766 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 SEMA3GQ9NS98 782 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 PLEKHB1Q9UF11 243 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 IL36AQ9UHA7 158 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 HMGN4O00479 90 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 PLD2O14939 933 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 TGM5O43548 720 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 LILRB3O75022 631 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 INHAP05111 366 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 FRKP42685 505 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 TGM4P49221 684 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 MANFP55145 182 aaKnown RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 NDUFA9Q16795 377 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 KIAA1211LQ6NV74 962 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 USP30Q70CQ3 517 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 BCDIN3DQ7Z5W3 292 aaKnown RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 DEFB128Q7Z7B8 93 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 KIAA0907Q7Z7F0 614 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 FAM129CQ86XR2 697 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 RBM45Q8IUH3 476 aaKnown RBP18.1■□□□□ 0.49
SDCBP-204ENST00000447182 GPR65Q8IYL9 337 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 ADGRF3Q8IZF5 1079 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 PSD4Q8NDX1 1056 aa18.1■□□□□ 0.49
SDCBP-204ENST00000447182 IRF7Q92985 503 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms