RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PKNOX2Q96KN3 472 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 TAAR6Q96RI8 345 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 KLHL1Q9NR64 748 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 PCDHA9Q9Y5H5 950 aa13.8□□□□□ -0.2
HDAC4-204ENST00000446876 CCDC151A5D8V7 595 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 SYNDIG1LA6NDD5 238 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 TMEM200CA6NKL6 621 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 TMEM233B4DJY2 109 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 PCDH7O60245 1069 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 VPS4BO75351 444 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ITGA10O75578 1167 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ZFAND5O76080 213 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 COX7A2P14406 83 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ARRB2P32121 409 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ETV4P43268 484 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ALDH9A1P49189 494 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ERVK-8P63133 956 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ACSM2AQ08AH3 577 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
HDAC4-204ENST00000446876 NR6A1Q15406 480 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 IMPG1Q17R60 797 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 SPDYAQ5MJ70 313 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 FAM180BQ6P0A1 224 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ST13P4Q8IZP2 240 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-204ENST00000446876 SUN3Q8TAQ9 357 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 RBM18Q96H35 190 aaKnown RBP13.79□□□□□ -0.2
HDAC4-204ENST00000446876 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 CLMPQ9H6B4 373 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 SENP1Q9P0U3 644 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 HEY2Q9UBP5 337 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 VPS4AQ9UN37 437 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 SVILO95425 2214 aa13.79□□□□□ -0.2
HDAC4-204ENST00000446876 GNG14A0A1W2PPG7 69 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 WDR91A4D1P6 747 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 WWP2O00308 870 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 AZIN1O14977 448 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ERLIN1O75477 346 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 NEURL1O76050 574 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 BPGMP07738 259 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 IL3P08700 152 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 UROSP10746 265 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 PIK3R1P27986 724 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 TIA1P31483 386 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 HK2P52789 917 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 DUSP2Q05923 314 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ASPHQ12797 758 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF267Q14586 743 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ARL13AQ5H913 290 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 HSDL2Q6YN16 418 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ZNF227Q86WZ6 799 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 ARMC10Q8N2F6 343 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 GALNT11Q8NCW6 608 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 OR4K14Q8NGD5 310 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 CDC26Q8NHZ8 85 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 LRFN1Q9P244 771 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 CES1P1Q9UKY3 287 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-204ENST00000446876 EML6Q6ZMW3 1958 aa13.78□□□□□ -0.2
HDAC4-204ENST00000446876 RELNP78509 3460 aa13.77□□□□□ -0.2
HDAC4-204ENST00000446876 C1orf226A1L170 272 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 SERTM1A2A2V5 107 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 H3BQF6 201 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 FCHO1O14526 889 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 NPHS1O60500 1241 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF354AO60765 605 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 GUCY1B2O75343 617 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 ERAL1O75616 437 aaKnown RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 OR2J2O76002 312 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 CLPSP04118 112 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 IGKV3-11P04433 115 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 CT62P0C5K7 136 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 SLC35E2P0CK97 266 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 FEN1P39748 380 aaKnown RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 SERPINB4P48594 390 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 CYB561P49447 251 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 HLCSP50747 726 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 XKP51811 444 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 RNF4P78317 190 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 MPP2Q14168 576 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 ESPL1Q14674 2120 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 CES4AQ5XG92 561 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 KANK2Q63ZY3 851 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 FAM180AQ6UWF9 173 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 TRIM46Q7Z4K8 759 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 C9orf40Q8IXQ3 194 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms