RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GTF2IRD2BQ6EKJ0 949 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 TMEM53Q6P2H8 277 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 GTF2IRD2Q86UP8 949 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLITRK4Q8IW52 837 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 TOMM5Q8N4H5 51 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 ATP6V1C2Q8NEY4 427 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 RIPOR3Q96MK2 946 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 DAPP51397 102 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 VLDLRP98155 873 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLC30A6Q6NXT4 461 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLC39A11Q8N1S5 342 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 MARK1Q9P0L2 795 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 C1orf226A1L170 272 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SCN2BO60939 215 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 PRLP01236 227 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 MT-ND5P03915 603 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF8P17098 575 aaPredicted RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 CR2P20023 1033 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLC7A9P82251 487 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 C6orf183Q5T699 404 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 ASCC1Q8N9N2 400 aaKnown RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 OR52E4Q8NGH9 312 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 EFHD2Q96C19 240 aaPredicted RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 WACQ9BTA9 647 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 DPAGT1Q9H3H5 408 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLC19A2O60779 497 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 IGLV3-27P01718 113 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 ACADLP28330 430 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 C21orf33P30042 268 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-206ENST00000445265 SGSHP51688 502 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-206ENST00000445265 THOC7Q6I9Y2 204 aaKnown RBP15.87■□□□□ 0.13
TCOF1-206ENST00000445265 LINC00299Q6ZSB3 139 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 B3GNT7Q8NFL0 401 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 OR2T33Q8NG76 320 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 NELL2Q99435 816 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 OR51E2Q9H255 320 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CKLFQ9UBR5 152 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CDH7Q9ULB5 785 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 H0YIV9 168 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 GABARAPO95166 117 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 GSTT2BP0CG30 244 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 MAP2K3P46734 347 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 RGS6P49758 472 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 ABATP80404 500 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 FAM214AQ32MH5 1076 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 OR6K6Q8NGW6 343 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 DPF3Q92784 378 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 TCF7L1Q9HCS4 588 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 MARCH5Q9NX47 278 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 IFI30P13284 250 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 RPA4Q13156 261 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 NFE2L1Q14494 772 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF776Q68DI1 518 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-206ENST00000445265 NRROSQ86YC3 692 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 SLC37A3Q8NCC5 494 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CIDECQ96AQ7 238 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-206ENST00000445265 C14orf105Q9NVL8 296 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CROCCQ5TZA2 2017 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CCL5P13501 91 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 CA5AP35218 305 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 SEC13P55735 322 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 SLAMF1Q13291 335 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 DHCR24Q15392 516 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 AAK1Q2M2I8 961 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 ENPP7Q6UWV6 458 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 PELI2Q9HAT8 420 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 HCSTQ9UBK5 93 aa15.87■□□□□ 0.13
TCOF1-206ENST00000445265 TCRBV5S2A0A599 114 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 MCIDASD6RGH6 385 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 CPNE3O75131 537 aaKnown RBP15.86■□□□□ 0.13
TCOF1-206ENST00000445265 APOL3O95236 402 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 ALPPL2P10696 532 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 PIGAP37287 484 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 CDKN2CP42773 168 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 ARFIP1P53367 373 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 SLC3A1Q07837 685 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 FRMPD2BQ6IN97 320 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 TAF8Q7Z7C8 310 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 FAM86B1Q8N7N1 296 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 OR51G2Q8NGK0 314 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 PDCD10Q9BUL8 212 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 CPNE6O95741 557 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 HNRNPA1P09651 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
TCOF1-206ENST00000445265 CTSAP10619 480 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 FSHRP23945 695 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 DPPA4Q7L190 304 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 LINGO2Q7L985 606 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 TMEM151AQ8N4L1 468 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 NUP43Q8NFH3 380 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 SECISBP2Q96T21 854 aaKnown RBP15.86■□□□□ 0.13
TCOF1-206ENST00000445265 GREB1LQ9C091 1923 aaPredicted RBP15.86■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF879B4DU55 563 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 KCNK5O95279 499 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 ASGR2P07307 311 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 GPX2P18283 190 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 MTNR1AP48039 350 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms