RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MSNP26038 577 aaKnown RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 GIFP27352 417 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 GJB2P29033 226 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SERPINB6P35237 376 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CNTN1Q12860 1018 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 GPR50Q13585 617 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 MAPK11Q15759 364 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SNAI3Q3KNW1 292 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RABL6Q3YEC7 729 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF789Q5FWF6 425 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 GLRA4Q5JXX5 417 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 PLPP4Q5VZY2 271 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 IYDQ6PHW0 289 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 BLOC1S2Q6QNY1 142 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RUFY3Q7L099 469 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 ASPGQ86U10 573 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC83Q8IWF9 413 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 FAM184AQ8NB25 1140 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 OR5M9Q8NGP3 310 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SMPDL3AQ92484 453 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SEPT8Q92599 483 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 BPIFA2Q96DR5 249 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CDKN2AIPNLQ96HQ2 116 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 EPSTI1Q96J88 318 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RBM4BQ9BQ04 359 aaKnown RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCM2Q9BSQ5 444 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CACNG6Q9BXT2 260 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 TEX13AQ9BXU3 409 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 BOLA2Q9H3K6 86 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 MMADHCQ9H3L0 296 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CUEDC2Q9H467 287 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 IL1RAPQ9NPH3 570 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 CWC25Q9NXE8 425 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 PAK5Q9P286 719 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 PILRAQ9UKJ1 303 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 KIF3AQ9Y496 699 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 KCPQ6ZWJ8 1503 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RPAP1Q9BWH6 1393 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 JCADQ9P266 1359 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 NHSL1Q5SYE7 1610 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 TJP1Q07157 1748 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SH3TC1Q8TE82 1336 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF609O15014 1411 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TNS2Q63HR2 1409 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 IGHV3OR16-10A0A075B7F0 116 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 A0A0D9SFI3 127 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 FAM170AA1A519 330 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC162PA2VCL2 907 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ANHXE9PGG2 379 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TFECO14948 347 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF263O14978 683 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 SNAP91O60641 907 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 GRAP2O75791 330 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ANGPTL1O95841 491 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM49P0CI25 452 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM49CP0CI26 452 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 VCLP18206 1134 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 AOC1P19801 751 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 NDST2P52849 883 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 SNU13P55769 128 aaKnown RBP3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 BACE1P56817 501 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 EVCP57679 992 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 UBE2HP62256 183 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ELAVL2Q12926 359 aaKnown RBP3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 CEACAM7Q14002 265 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 HSP90AB3PQ58FF7 597 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC183Q5T5S1 534 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF776Q68DI1 518 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF343Q6P1L6 599 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC43A2Q8N370 569 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 METTL4Q8N3J2 472 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMCO5AQ8N6Q1 288 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 OR9Q2Q8NGE9 314 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATOH8Q96SQ7 321 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 LRRC61Q9BV99 259 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 TSPY26PQ9H489 355 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 PNPLA3Q9NST1 481 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 NLGN3Q9NZ94 848 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 KLK11Q9UBX7 282 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 USP16Q9Y5T5 823 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 PALLDQ8WX93 1383 aa3.72□□□□□ -1.81
HMGB3P6-201ENST00000444896 PLCH1Q4KWH8 1693 aa3.71□□□□□ -1.81
HMGB3P6-201ENST00000444896 LRP6O75581 1613 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 SHANK3Q9BYB0 1731 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 SYCE3A1L190 88 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 VPS37CA5D8V6 355 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 A8MU76 341 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 CRLF1O75462 422 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 CIAO1O76071 339 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 SYT1P21579 422 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC1A3P43003 542 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 HSPA2P54652 639 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 STX1BP61266 288 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 ERVK-16P61578 105 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 ENPP2Q13822 863 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 RCN2Q14257 317 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms