RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 WNT3P56703 355 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 SRSF11Q05519 484 aaKnown RBP18.02■□□□□ 0.47
PMPCB-204ENST00000444457 ZNF33BQ06732 778 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 RGS1Q08116 209 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 HKDC1Q2TB90 917 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.02■□□□□ 0.47
PMPCB-204ENST00000444457 GLCCI1Q86VQ1 547 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 WDR20Q8TBZ3 569 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 LIN7BQ9HAP6 207 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 PLEKHB1Q9UF11 243 aaPredicted RBP18.02■□□□□ 0.47
PMPCB-204ENST00000444457 KCNE2Q9Y6J6 123 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 AP1M2Q9Y6Q5 423 aa18.02■□□□□ 0.47
PMPCB-204ENST00000444457 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 MPZL2O60487 215 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 PRMT3O60678 531 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 SCN2BO60939 215 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 CSO75390 466 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 CCL5P13501 91 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 TNNI3P19429 210 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 IL32P24001 234 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 RAB25P57735 213 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 ANGPT1Q15389 498 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 MICAQ29983 383 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 XKR6Q5GH73 641 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 TMEM65Q6PI78 240 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 HSDL2Q6YN16 418 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 THOC6Q86W42 341 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 SLC44A2Q8IWA5 706 aaPredicted RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 LGI4Q8N135 537 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 UPRTQ96BW1 309 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 DOHHQ9BU89 302 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 KCNN2Q9H2S1 579 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 VPS29Q9UBQ0 182 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 PTPRSQ13332 1948 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 MAGEB17A8MXT2 336 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 UPK3BL1B0FP48 263 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 UPK3BL2E5RIL1 263 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 E7EQ34 232 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 PSIP1O75475 530 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 LEFTY1O75610 366 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 CDRT1O95170 752 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 COX7A2P14406 83 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 TYRP14679 529 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 HENMT1Q5T8I9 393 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 DDI2Q5TDH0 399 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 TRAM1L1Q8N609 369 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 C1orf52Q8N6N3 182 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 IRF7Q92985 503 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 TCEAL4Q96EI5 215 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 MTERF1Q99551 399 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 RIOK2Q9BVS4 552 aaKnown RBP18.01■□□□□ 0.47
PMPCB-204ENST00000444457 CLN6Q9NWW5 311 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 SSR3Q9UNL2 185 aa18.01■□□□□ 0.47
PMPCB-204ENST00000444457 I3L521 148 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 TPST2O60704 377 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 SLC43A1O75387 559 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 ADH1AP07327 375 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 ARSBP15848 533 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 SSTR4P31391 388 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 EVI2BP34910 448 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 MXD1Q05195 221 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 HNRNPA0Q13151 305 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 DDX39BQ13838 428 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 PTGES3Q15185 160 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 SPHARQ15513 63 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 TMEM215Q68D42 235 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 MZT2BQ6NZ67 158 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 TEX261Q6UWH6 196 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 OR8J2Q8NGG1 315 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 ZBED6CLQ96FA7 236 aaPredicted RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 QRFPRQ96P65 431 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 MARVELD1Q9BSK0 173 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 SPATA6Q9NWH7 488 aaPredicted RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 FAM120CQ9NX05 1096 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 RUVBL1Q9Y265 456 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 U3KQ87 197 aa18■□□□□ 0.47
PMPCB-204ENST00000444457 MTCL1Q9Y4B5 1905 aaKnown RBP18■□□□□ 0.47
PMPCB-204ENST00000444457 AGRPO00253 132 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 TNFRSF21O75509 655 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 RFPL3O75679 317 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 CXCL14O95715 111 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 MSL3P1P0C860 447 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 MRPL28Q13084 256 aaKnown RBP17.99■□□□□ 0.47
PMPCB-204ENST00000444457 DOC2AQ14183 400 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 HDDC2Q7Z4H3 204 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 ATP6V1C2Q8NEY4 427 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 CLP1Q92989 425 aaKnown RBP17.99■□□□□ 0.47
PMPCB-204ENST00000444457 TIFAQ96CG3 184 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 SLC25A19Q9HC21 320 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 SOX9P48436 509 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 MAN2A2P49641 1150 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 ACSM2AQ08AH3 577 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 EXOC3L2Q2M3D2 409 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 WSCD2Q2TBF2 565 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 SYTL3Q4VX76 610 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 ARSIQ5FYB1 569 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 ACSM2BQ68CK6 577 aa17.99■□□□□ 0.47
PMPCB-204ENST00000444457 ZNF621Q6ZSS3 439 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms