RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZXDBP98169 803 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 COLEC12Q5KU26 742 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 OR56A3Q8NH54 315 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 ASB15Q8WXK1 588 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 PCDHAC1Q9H158 963 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 NEK6Q9HC98 313 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 EURLQ9NYK6 297 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 RSL24D1Q9UHA3 163 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 SNX11Q9Y5W9 270 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 LMO7DNF2Z398 122 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 FLRT2O43155 660 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 AHSA1O95433 338 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 P04436 131 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 RAP2AP10114 183 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 ATP1A4Q13733 1029 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 SNAPC1Q16533 368 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 SFTPA1Q8IWL2 248 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 TMEM234Q8WY98 164 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 TBC1D20Q96BZ9 403 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 POMPQ9Y244 141 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF236Q9UL36 1845 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 PNMA8CA0A1B0GUJ8 204 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 FAM149AA5PLN7 773 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 IGFBP5P24593 272 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 DGUOKQ16854 277 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 SMU1Q2TAY7 513 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 GATSQ8NAP1 163 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 FANCFQ9NPI8 374 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 PPP4R1LQ9P1A2 415 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 PADI1Q9ULC6 663 aa13.41□□□□□ -0.26
SMARCA4-204ENST00000444061 C17orf105B2RV13 164 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 CHST10O43529 356 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 CSTAP01040 98 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TSPAN19P0C672 248 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 CHRNB1P11230 501 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 ETV4P43268 484 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 SBSNQ6UWP8 590 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF554Q86TJ5 538 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 SLC5A8Q8N695 610 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 RSC1A1Q92681 617 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 DIO2Q92813 273 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 RNF215Q9Y6U7 377 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 A8MVJ9 347 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 LAMP1P11279 417 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 FOXA1P55317 472 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 GANABQ14697 944 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 SYT16Q17RD7 645 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 HORMAD2Q8N7B1 307 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TSPAN14Q8NG11 270 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 RORBQ92753 470 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 METTL2AQ96IZ6 378 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 RBM4BQ9BQ04 359 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 RBM4Q9BWF3 364 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 SORBS1Q9BX66 1292 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 HPF1Q9NWY4 346 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 IFT52Q9Y366 437 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 AQP12BA6NM10 295 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TMCC2O75069 709 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 SNNO75324 88 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TRAP1Q12931 704 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 AQP12AQ8IXF9 295 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 OR51I1Q9H343 314 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 S100A14Q9HCY8 104 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TRIP11Q15643 1979 aa13.4□□□□□ -0.26
SMARCA4-204ENST00000444061 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 AKAP8O43823 692 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 PRKD3O94806 890 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 KIR2DL1P43626 348 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 DCDP81605 110 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 GALNT5Q7Z7M9 940 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 GTPBP3Q969Y2 492 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 CENPNQ96H22 339 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 EHD1Q9H4M9 534 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 A6NL46 340 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ARPC2O15144 300 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ACTR3P61158 418 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 BNIP3Q12983 259 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 CCSMST1Q4G0I0 132 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 OR4C6Q8NH72 309 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF726A6NNF4 738 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 PPP6CO00743 305 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 RRP8O43159 456 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 SIGLEC6O43699 453 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms