RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SYT10Q6XYQ8 523 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 RNF111Q6ZNA4 994 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 NUDT13Q86X67 352 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 ST13P4Q8IZP2 240 aaPredicted RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 CENPLQ8N0S6 344 aaPredicted RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 SLC15A4Q8N697 577 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 TMEM251Q8N6I4 163 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 OR5M9Q8NGP3 310 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 SARAFQ96BY9 339 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 SPACA9Q96E40 222 aaPredicted RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 FBXL20Q96IG2 436 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 SORBS1Q9BX66 1292 aaKnown RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 VPS11Q9H270 941 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 SLC24A3Q9HC58 644 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 B4GALT7Q9UBV7 327 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 MTRF1LQ9UGC7 380 aaKnown RBP10.89□□□□□ -0.67
TTC28-203ENST00000442232 ACAD8Q9UKU7 415 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 TSC22D4Q9Y3Q8 395 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 IKBKGQ9Y6K9 419 aa10.89□□□□□ -0.67
TTC28-203ENST00000442232 A0A096LPK6 155 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ATP6AP2A0A1C7CYW4 349 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 OR6C76A6NM76 312 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 FAM47E-STBD1D6RA91 191 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 H0YIV9 168 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 AQP7O14520 342 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 WDR1O75083 606 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ATP6AP2O75787 350 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 GLSO94925 669 aaPredicted RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 KLHL2O95198 593 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 C2P06681 752 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 FAM58BPP0C7Q3 252 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 CCL3P10147 92 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 SERPINB3P29508 390 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 DNASE1L1P49184 302 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 CCNG1P51959 295 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 NUP107P57740 925 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ETF1P62495 437 aaKnown RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 HERVK_113P63132 956 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ERVK-8P63133 956 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 SLC10A1Q14973 349 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 PCBP2Q15366 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
TTC28-203ENST00000442232 CPSF6Q16630 551 aaKnown RBP eCLIP10.88□□□□□ -0.67
TTC28-203ENST00000442232 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 WLSQ5T9L3 541 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 HLA-DQA1Q5Y7H0 255 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 SLC22A10Q63ZE4 541 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TTC19Q6DKK2 380 aaPredicted RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 OR52E8Q6IFG1 317 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 METTL2BQ6P1Q9 378 aaKnown RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 ZDHHC24Q6UX98 284 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 B3GNT6Q6ZMB0 384 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 OTOGQ6ZRI0 2925 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TRILQ7L0X0 811 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 GOLGA7Q7Z5G4 137 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 CDH24Q86UP0 819 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 C9orf40Q8IXQ3 194 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ZNF295-AS1Q8N0V1 137 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TAGAPQ8N103 731 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 LIX1Q8N485 282 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 RNF175Q8N4F7 328 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 MARVELD2Q8N4S9 558 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 LILRB4Q8NHJ6 448 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 RIT1Q92963 219 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 PPWD1Q96BP3 646 aaKnown RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 SERPINI1Q99574 410 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ERVK-6Q9BXR3 956 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ENKD1Q9H0I2 346 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 IPPKQ9H8X2 491 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 MCCC2Q9HCC0 563 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 PNPLA3Q9NST1 481 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TUBA8Q9NY65 449 aaPredicted RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 CNIH4Q9P003 139 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TMCO1Q9UM00 188 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ERVK-19Q9WJR5 959 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 ATG4BQ9Y4P1 393 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.88□□□□□ -0.67
TTC28-203ENST00000442232 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
TTC28-203ENST00000442232 TACC2O95359 2948 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 FBN2P35556 2912 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 CAPN14A8MX76 684 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 TP53I11O14683 189 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 PROM1O43490 865 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 SUSD5O60279 629 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 HCN1O60741 890 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 SMIM24O75264 130 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 CLDN9O95484 217 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 GPR75O95800 540 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 IGHG3P01860 377 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 IGKV3-11P04433 115 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 INHBAP08476 426 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 RBP1P09455 135 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 MTHFD2P13995 350 aa10.87□□□□□ -0.67
TTC28-203ENST00000442232 TMED10P49755 219 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms