RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 OR2B2Q9GZK3 357 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 KLHL31Q9H511 634 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SYNPO2LQ9H987 977 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CMTM6Q9NX76 183 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SUCOQ9UBS9 1254 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CD300AQ9UGN4 299 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EXO1Q9UQ84 846 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 BTBD3Q9Y2F9 522 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PCDHA9Q9Y5H5 950 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PCM1Q15154 2024 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 A0A096LPI6 279 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PRSS51A0A1B0GVH4 220 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 URADA6NGE7 173 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 YKT6O15498 198 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 KLHL18O94889 574 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 BAG2O95816 211 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 FURINP09958 794 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 SP9P0CG40 484 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 GIMD1P0DJR0 217 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ALPPL2P10696 532 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ALDH4A1P30038 563 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 MSX2P35548 267 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TSFMP43897 325 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 MC1RQ01726 317 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 FLOT2Q14254 428 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 HLA-BQ31612 363 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 FAM156AQ8NDB6 213 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 NT5CQ8TCD5 201 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 CAPSLQ8WWF8 208 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 GAL3ST3Q96A11 431 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TMIGD2Q96BF3 282 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 C12orf43Q96C57 262 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TEFMQ96QE5 360 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PANX1Q96RD7 426 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 DUSP23Q9BVJ7 150 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 AICDAQ9GZX7 198 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 IL21RQ9HBE5 538 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 SERHLQ9NQF3 203 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 C1GALT1Q9NS00 363 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 VAPAQ9P0L0 249 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 AP3M1Q9Y2T2 418 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 CORINQ9Y5Q5 1042 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 RNF215Q9Y6U7 377 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 THADAQ6YHU6 1953 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 hCG_2039718K7EN88 272 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TMPRSS11DO60235 418 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PRAMEF10O60809 474 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PAHP00439 452 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ICAM2P13598 275 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ST6GAL1P15907 406 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 GLB1P16278 677 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 HIST1H1TP22492 207 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 HSPA13P48723 471 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 CENPAP49450 140 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 WNT3P56703 355 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 EEFSECP57772 596 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 RAB8AP61006 207 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 POLR2GP62487 172 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TRA2BP62995 288 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 LRRC74AQ0VAA2 488 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PDE7AQ13946 482 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TRIM25Q14258 630 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 SLC9A5Q14940 896 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 LRIF1Q5T3J3 769 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 RNF44Q7L0R7 432 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF655Q8N720 491 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 SIMC1Q8NDZ2 872 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 OR8J3Q8NGG0 315 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TM4SF18Q96CE8 201 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 ASB9Q96DX5 294 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TM4SF19Q96DZ7 209 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 AHCYL2Q96HN2 611 aaKnown RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TRIM8Q9BZR9 551 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 BHLHE41Q9C0J9 482 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 COPS7BQ9H9Q2 264 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-201ENST00000442201 PRDM7Q9NQW5 492 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TAS2R7Q9NYW3 318 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 NLGN3Q9NZ94 848 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 POLHQ9Y253 713 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 TTC28Q96AY4 2481 aa7.66□□□□□ -1.18
CCDC39-201ENST00000442201 A0A0A6YYD5 115 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 H0YGG7 62 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SCN2BO60939 215 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 HSD17B1P14061 328 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ATP5A1P25705 553 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 DCKP27707 260 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ERFP50548 548 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ARF3P61204 181 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GALK2Q01415 458 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ANGPT1Q15389 498 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ZBED5Q49AG3 693 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 FAM205BPQ63HN1 556 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 FRMPD2BQ6IN97 320 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF793Q6ZN11 406 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 IGFN1Q86VF2 1251 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GATAD2AQ86YP4 633 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms