RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DOC2BQ14184 412 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 EIF4HQ15056 248 aaKnown RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 RPS26P11Q5JNZ5 115 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 BRAT1Q6PJG6 821 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 PRSS42Q7Z5A4 293 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 MARCH9Q86YJ5 346 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 LNX2Q8N448 690 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 OR4M1Q8NGD0 313 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ST8SIA4Q92187 359 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 RAB8BQ92930 207 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 RNFT2Q96EX2 444 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 C7orf34Q96L11 122 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ZFP3Q96NJ6 502 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SLC29A3Q9BZD2 475 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 DNAJC11Q9NVH1 559 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SBF1O95248 1867 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 OR6C65A6NJZ3 312 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 YY2O15391 372 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 C1QBP02746 253 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 PCSK2P16519 638 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 CELP19835 753 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 HLA-FP30511 346 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 NNMTP40261 264 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SLC11A2P49281 568 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ARFIP1P53367 373 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SLC16A1P53985 500 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 RRAS2P62070 204 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 CDK6Q00534 326 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 GAB1Q13480 694 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 DSG2Q14126 1118 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 HEPACAMQ14CZ8 416 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 FAM171BQ6P995 826 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ADGRD2Q7Z7M1 963 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ATCAYQ86WG3 371 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 C2orf73Q8N5S3 287 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 GDPD1Q8N9F7 314 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 CSGALNACT1Q8TDX6 532 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SMG7Q92540 1137 aaKnown RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 AP3S1Q92572 193 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 C11orf24Q96F05 449 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 CMTM7Q96FZ5 175 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 STOML2Q9UJZ1 356 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 GLYATL1P3A0A0U1RQE8 302 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 GABRR3A8MPY1 467 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF670-ZNF695F2Z2N8 137 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 PLATP00750 562 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 SCG5P05408 212 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 CPN2P22792 545 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ETV6P41212 452 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ASAH1Q13510 395 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 KIF18BQ86Y91 864 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ZBED6CLQ96FA7 236 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF831Q5JPB2 1677 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 A0A0G2JLL6 359 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 POM121CA8CG34 1229 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 GNB5O14775 395 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 DHFRP00374 187 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF806P0C7X5 589 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 AMD1P17707 334 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 ZNF91Q05481 1191 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 INSL4Q14641 139 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 MFSD13AQ14CX5 517 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 TMEM81Q6P7N7 255 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 CXCL17Q6UXB2 119 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PRRT2Q7Z6L0 340 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 HYLS1Q96M11 299 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 TBX5Q99593 518 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 GABARAPL3Q9BY60 117 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 ABCG5Q9H222 651 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 SLAMF7Q9NQ25 335 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PLCXD1Q9NUJ7 323 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 NUDT15Q9NV35 164 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PTGFRNQ9P2B2 879 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PRMT3O60678 531 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 RFPL3O75679 317 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 SLC22A5O76082 557 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 ECDO95905 644 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 HEXBP07686 556 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 HBQ1P09105 142 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 HOXB6P17509 224 aaKnown RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PCP4P48539 62 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 DUSP4Q13115 394 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 DCST1Q5T197 706 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 LIMS2Q7Z4I7 341 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 TMEM145Q8NBT3 493 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 CREB3L4Q8TEY5 395 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 UPRTQ96BW1 309 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms