RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PNPLA2Q96AD5 504 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 TUBB1Q9H4B7 451 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 PNO1Q9NRX1 252 aaKnown RBP16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CSAG2Q9Y5P2 127 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 USH1CQ9Y6N9 552 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 DIDO1Q9BTC0 2240 aaKnown RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 SERTM1A2A2V5 107 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 SAGE2PA6NJ88 616 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 KLHL41O60662 606 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 KLK1P06870 262 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 FAM58BPP0C7Q3 252 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 TROVE2P10155 538 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 ICAM2P13598 275 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 ALOX15P16050 662 aaPredicted RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 BUD31P41223 144 aaPredicted RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 BTKQ06187 659 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 STX4Q12846 297 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 CSTF3Q12996 717 aaKnown RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 PDCD2Q16342 344 aaPredicted RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 SLC6A19Q695T7 634 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 ISLR2Q6UXK2 745 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 TM9SF4Q92544 642 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 CCT7Q99832 543 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 ACPTQ9BZG2 426 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 NSRP1Q9H0G5 558 aaKnown RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 NPHS2Q9NP85 383 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 LYARQ9NX58 379 aaKnown RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 TEX10Q9NXF1 929 aaPredicted RBP16.53■□□□□ 0.24
CCDC188-201ENST00000439765 AHSPQ9NZD4 102 aa16.53■□□□□ 0.24
CCDC188-201ENST00000439765 ARHGAP10A1A4S6 786 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 GLOD5A6NK44 160 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 PIP5K1BO14986 540 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 FGF17O60258 216 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 VPS4BO75351 444 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 AIFM1O95831 613 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 IFNA16P05015 189 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 JUNP05412 331 aaKnown RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 NR2F6P10588 404 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 TPP2P29144 1249 aaPredicted RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 AP2B1P63010 937 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 HMGCS1Q01581 520 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 CRB2Q5IJ48 1285 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 FCRLBQ6BAA4 426 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 MRM1Q6IN84 353 aaKnown RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 IGFL3Q6UXB1 125 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 PAGE2Q7Z2X7 111 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 MAVSQ7Z434 540 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 OR4N5Q8IXE1 308 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 METTL4Q8N3J2 472 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 KIF2BQ8N4N8 673 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 C1orf52Q8N6N3 182 aaKnown RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 THOC1Q96FV9 657 aaKnown RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 SIKE1Q9BRV8 207 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 NUF2Q9BZD4 464 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 FAM107BQ9H098 131 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 EPS8L2Q9H6S3 715 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 RPF2Q9H7B2 306 aaKnown RBP16.52■□□□□ 0.23
CCDC188-201ENST00000439765 KCNK13Q9HB14 408 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 PFDN4Q9NQP4 134 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 MS4A12Q9NXJ0 267 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 VPS4AQ9UN37 437 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 ASB4Q9Y574 426 aa16.52■□□□□ 0.23
CCDC188-201ENST00000439765 DOPEY1Q5JWR5 2465 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 A0A1W2PR48 441 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 A8MUI8 341 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 PROM1O43490 865 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 CTNSO60931 367 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 LINC00032P0C843 101 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 HSD3B1P14060 373 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 HSD3B2P26439 372 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 TLX1P31314 330 aaPredicted RBP16.51■□□□□ 0.23
CCDC188-201ENST00000439765 SOX11P35716 441 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 UQCRFS1P47985 274 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 MAPK12P53778 367 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 AQP5P55064 265 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 CBX1P83916 185 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 TBL3Q12788 808 aaKnown RBP16.51■□□□□ 0.23
CCDC188-201ENST00000439765 MFAP5Q13361 173 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 INPP5JQ15735 1006 aaPredicted RBP16.51■□□□□ 0.23
CCDC188-201ENST00000439765 CCNYL2Q5T2Q4 361 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 EPGNQ6UW88 154 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 TRIM46Q7Z4K8 759 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 DDIASQ8IXT1 998 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 RFWD2Q8NHY2 731 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 M1APQ8TC57 530 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 C19orf60Q96EN9 201 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 CCT8L2Q96SF2 557 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 MEAF6Q9HAF1 191 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 MMP25Q9NPA2 562 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 PTGDR2Q9Y5Y4 395 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 CROCCQ5TZA2 2017 aa16.51■□□□□ 0.23
CCDC188-201ENST00000439765 BLACEA4D250 179 aa16.5■□□□□ 0.23
CCDC188-201ENST00000439765 SLC28A1O00337 649 aa16.5■□□□□ 0.23
CCDC188-201ENST00000439765 F10P00742 488 aa16.5■□□□□ 0.23
CCDC188-201ENST00000439765 FOLH1Q04609 750 aa16.5■□□□□ 0.23
CCDC188-201ENST00000439765 Q6ZSR9 355 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms