RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PPWD1Q96BP3 646 aaKnown RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SCMH1Q96GD3 660 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SENP5Q96HI0 755 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 APOPT1Q96IL0 206 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 CNPPD1Q9BV87 410 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 GSTO2Q9H4Y5 243 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 TIMMDC1Q9NPL8 285 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 FARSBQ9NSD9 589 aaKnown RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 OXSMQ9NWU1 459 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 HPF1Q9NWY4 346 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MKS1Q9NXB0 559 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SENP1Q9P0U3 644 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MYOTQ9UBF9 498 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 LGALS13Q9UHV8 139 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MCM8Q9UJA3 840 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF225Q9UK10 706 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 EMCNQ9ULC0 261 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 PLLPQ9Y342 182 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 TIMM22Q9Y584 194 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 PCDHA9Q9Y5H5 950 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 A0A1B0GTL3 188 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 GLOD5A6NK44 160 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 OR6C76A6NM76 312 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 FOXO6A8MYZ6 492 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 WWP2O00308 870 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 MAN1A2O60476 641 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SLC25A12O75746 678 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 NEURL1O76050 574 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 DDAH2O95865 285 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 CHEK2O96017 543 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 PORP16435 677 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 NT5EP21589 574 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 GSTM5P46439 218 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 XKP51811 444 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 HK2P52789 917 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SRSF11Q05519 484 aaKnown RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 BTKQ06187 659 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 TBL3Q12788 808 aaKnown RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF267Q14586 743 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 HEPACAMQ14CZ8 416 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SPRED3Q2MJR0 410 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SPDYAQ5MJ70 313 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 NDUFAF5Q5TEU4 345 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 HLA-DQA1Q5Y7H0 255 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 GFRALQ6UXV0 394 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SRRM1Q8IYB3 904 aaKnown RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SAMD14Q8IZD0 417 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 CYP4Z2PQ8N1L4 340 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 C1orf52Q8N6N3 182 aaKnown RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 BANPQ8N9N5 519 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 NUBPLQ8TB37 319 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SLC22A8Q8TCC7 542 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF721Q8TF20 911 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 AGAP11Q8TF27 550 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 CHTF18Q8WVB6 975 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 FBXL20Q96IG2 436 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 TAAR6Q96RI8 345 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SLX1AQ9BQ83 275 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 TMEM109Q9BVC6 243 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 EML4Q9HC35 981 aaKnown RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SEC14L3Q9UDX4 400 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF223Q9UK11 482 aaPredicted RBP9.73□□□□□ -0.85
MCF2L-216ENST00000439475 RAB21Q9UL25 225 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 CFL2Q9Y281 166 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 ZGRF1Q86YA3 2104 aa9.73□□□□□ -0.85
MCF2L-216ENST00000439475 SMG1Q96Q15 3661 aaKnown RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 CROCCQ5TZA2 2017 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 GNG14A0A1W2PPG7 69 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 CAPN14A8MX76 684 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 SLC28A1O00337 649 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 PGRMC2O15173 223 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 NME2P1O60361 137 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 PRKRAO75569 313 aaKnown RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ERAL1O75616 437 aaKnown RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 OR2J2O76002 312 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 MYZAPP0CAP1 466 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 UROSP10746 265 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 DRD2P14416 443 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 CSNK2A2P19784 350 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 NME2P22392 152 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ALDH9A1P49189 494 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ST13P50502 369 aaKnown RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 CASP6P55212 293 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 PER3P56645 1201 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ERVK-8P63133 956 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 GALNT1Q10472 559 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 MPEG1Q2M385 716 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 KRT71Q3SY84 523 aa9.72□□□□□ -0.85
MCF2L-216ENST00000439475 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF468Q5VIY5 522 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms