RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 O00370 1275 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 KIF5CO60282 957 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 NXPH2O95156 264 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 GJB5O95377 273 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 C9P02748 559 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PIK3R1P27986 724 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 MMP12P39900 470 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 SOX3P41225 446 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 NOVA1P51513 510 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 CLDN17P56750 224 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 DCDC1P59894 354 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 CSNK2BP67870 215 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 DEFB103AP81534 67 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ABRQ12979 859 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 SGCGQ13326 291 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 MTF1Q14872 753 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 TAF7Q15545 349 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD20A4Q4UJ75 823 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD20A8PQ5CZ79 823 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD20A2Q5SQ80 823 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD20A1Q5TYW2 823 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD20A3Q5VUR7 823 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 NOTUMQ6P988 496 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 LEKR1Q6ZMV7 388 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 STXBP4Q6ZWJ1 553 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 FCRLAQ7L513 359 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PIWIL3Q7Z3Z3 882 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 CPEB2Q7Z5Q1 589 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 IQCA1Q86XH1 822 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 MEX3DQ86XN8 651 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 C4orf19Q8IY42 314 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 LSMEM2Q8N112 164 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 LYG1Q8N1E2 194 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 TMCO5AQ8N6Q1 288 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 SMYD1Q8NB12 490 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ATAD1Q8NBU5 361 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 UBLCP1Q8WVY7 318 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 C2orf48Q96LS8 159 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ALKBH7Q9BT30 221 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PITPNM3Q9BZ71 974 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRPV6Q9H1D0 765 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ALDH8A1Q9H2A2 487 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 DPEP2Q9H4A9 486 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 RPF1Q9H9Y2 349 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PDRG1Q9NUG6 133 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PANK4Q9NVE7 773 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 TBC1D13Q9NVG8 400 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 NOCTQ9UK39 431 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 BARX2Q9UMQ3 279 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PCDHGA1Q9Y5H4 931 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 KLK4Q9Y5K2 254 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZFP37Q9Y6Q3 630 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 IL16Q14005 1332 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 PLXNB2O15031 1838 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 DMDP11532 3685 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 HECTD1Q9ULT8 2610 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 ABCA12Q86UK0 2595 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DOPEY1Q5JWR5 2465 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 OOEPA6NGQ2 149 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 A8MVM7 634 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 PGRMC2O15173 223 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 LRP3O75074 770 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 IGHEP01854 428 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DCNP07585 359 aaKnown RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 ITIH1P19827 911 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CYP2A7P20853 494 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CTNNB1P35222 781 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 KRT2P35908 639 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR3A1P47881 315 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR3A2P47893 321 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DSCR10P59022 87 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 BTG1P62324 171 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CSTF1Q05048 431 aaKnown RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DRP2Q13474 957 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 RCN2Q14257 317 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLMAPQ14BN4 828 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DUSP5Q16690 384 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 MEP1BQ16820 701 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 HLA-BQ31612 363 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 TWISTNBQ3B726 338 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 FGD3Q5JSP0 725 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 SPOUT1Q5T280 376 aaKnown RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRIM65Q6PJ69 517 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 FIP1L1Q6UN15 594 aaKnown RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 DHRS11Q6UWP2 260 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 Q6ZRP5 223 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 PRUNE1Q86TP1 453 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD46Q86W74 232 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CCDC60Q8IWA6 550 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CCDC170Q8IYT3 715 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM89BQ8N5H3 189 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 MAPK15Q8TD08 544 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 GATAD1Q8WUU5 269 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNRF4Q8WWF5 429 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 VMP1Q96GC9 406 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 TESK2Q96S53 571 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 VGLL1Q99990 258 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CABLES2Q9BTV7 478 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 MLPHQ9BV36 600 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 FGFBP2Q9BYJ0 223 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms