RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PROS1P07225 676 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 FERP16591 822 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 EEF1B2P24534 225 aaKnown RBP2.43□□□□□ -2.02
PTPN4-205ENST00000433888 RPA1P27694 616 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SSTR1P30872 391 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 TIA1P31483 386 aaKnown RBP eCLIP2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SOAT1P35610 550 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 CAMLGP49069 296 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 MEOX2P50222 304 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SERPINH1P50454 418 aaKnown RBP2.43□□□□□ -2.02
PTPN4-205ENST00000433888 NAGLUP54802 743 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 UCP2P55851 309 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 CLDN17P56750 224 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SMC1AQ14683 1233 aaKnown RBP2.43□□□□□ -2.02
PTPN4-205ENST00000433888 MORF4L2Q15014 288 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 KBTBD12Q3ZCT8 623 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SLC22A6Q4U2R8 563 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 VWA2Q5GFL6 755 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 MUC21Q5SSG8 566 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 WSCD1Q658N2 575 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SIGLEC15Q6ZMC9 328 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 TOM1L2Q6ZVM7 507 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 TEX26Q8N6G2 289 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 NCOA7Q8NI08 942 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 SGF29Q96ES7 293 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 ALKBH3Q96Q83 286 aaPredicted RBP2.43□□□□□ -2.02
PTPN4-205ENST00000433888 DEFB126Q9BYW3 111 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 ZNF350Q9GZX5 532 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 CUEDC2Q9H467 287 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 PLEKHA6Q9Y2H5 1048 aa2.43□□□□□ -2.02
PTPN4-205ENST00000433888 TRAV9-2A0A087WT02 112 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 A0A0B4J203 849 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RGSL1A5PLK6 1076 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 CCDC69A6NI79 296 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 KBTBD13C9JR72 458 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 H3BMM5 538 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 SEC22BO75396 215 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 GMNNO75496 209 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 SIX3O95343 332 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PIGRP01833 764 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 NUDT17P0C025 328 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 GHRP10912 638 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 UGT1A6P19224 532 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 MAPK3P27361 379 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 CASP3P42574 277 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 STX1BP61266 288 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 TEFQ10587 303 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 KARSQ15046 597 aaKnown RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RPS6KA1Q15418 735 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 MAPK11Q15759 364 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RBBP7Q16576 425 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 UGCGQ16739 394 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PCK2Q16822 640 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 AARDQ4LEZ3 155 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 C9orf129Q5T035 196 aaKnown RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ETFRF1Q6IPR1 90 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RFWD3Q6PCD5 774 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 UNC5DQ6UXZ4 953 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 C1orf186Q6ZWK4 172 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PRUNE1Q86TP1 453 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 NAXDQ8IW45 347 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 TIGD4Q8IY51 512 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PRSS35Q8N3Z0 413 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 BANPQ8N9N5 519 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 URGCPQ8TCY9 931 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 BCL2L2Q92843 193 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 DTD2Q96FN9 168 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ERO1AQ96HE7 468 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PPP1R16AQ96I34 528 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 EPSTI1Q96J88 318 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ZNF560Q96MR9 790 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ABCG4Q9H172 646 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RNPEPL1Q9HAU8 725 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ZNF275Q9NSD4 429 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ANO10Q9NW15 660 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 TMEM161AQ9NX61 479 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 TMOD3Q9NYL9 352 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 PKD2L2Q9NZM6 624 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 ARMCX1Q9P291 453 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 SPASTQ9UBP0 616 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 SLC12A6Q9UHW9 1150 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 FBXL5Q9UKA1 691 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 APPL1Q9UKG1 709 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 TMCC3Q9ULS5 477 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 CLEC4EQ9ULY5 219 aa2.42□□□□□ -2.02
PTPN4-205ENST00000433888 RPH3AQ9Y2J0 694 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 MTF2Q9Y483 593 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-205ENST00000433888 KIAA1217Q5T5P2 1943 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 BCLAF3A2AJT9 711 aaKnown RBP2.41□□□□□ -2.02
PTPN4-205ENST00000433888 IGLON5A6NGN9 336 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 E5RGE8 158 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 TLR4O00206 839 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 SLC30A4O14863 429 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 FLRT2O43155 660 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 KIF5CO60282 957 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 SMPD2O60906 423 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 GUCA1CO95843 209 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 IGHDP01880 384 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 IGKV3-11P04433 115 aa2.41□□□□□ -2.02
PTPN4-205ENST00000433888 ABHD2P08910 425 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms