RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LPCAT2Q7L5N7 544 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 MEX3DQ86XN8 651 aaKnown RBP2.5□□□□□ -2.01
CLK1-204ENST00000432425 SLC34A3Q8N130 599 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 OR13C5Q8NGS8 318 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 PCNPQ8WW12 178 aaKnown RBP2.5□□□□□ -2.01
CLK1-204ENST00000432425 LIPHQ8WWY8 451 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 SMPDL3AQ92484 453 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 ZIM3Q96PE6 472 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 RCHY1Q96PM5 261 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 RAB3IPQ96QF0 476 aaPredicted RBP2.5□□□□□ -2.01
CLK1-204ENST00000432425 LIME1Q9H400 295 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 LMAN1LQ9HAT1 526 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 DDX18Q9NVP1 670 aaKnown RBP2.5□□□□□ -2.01
CLK1-204ENST00000432425 AKAP7Q9P0M2 348 aaPredicted RBP2.5□□□□□ -2.01
CLK1-204ENST00000432425 SH3GLB1Q9Y371 365 aa2.5□□□□□ -2.01
CLK1-204ENST00000432425 ZSCAN5CA6NGD5 496 aaPredicted RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 ANHXE9PGG2 379 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 AP3B1O00203 1094 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CACNB4O00305 520 aaPredicted RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 RIPK2O43353 540 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 ZBTB14O43829 449 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 KERAO60938 352 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 RTN2O75298 545 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 VENTXO95231 258 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 HCKP08631 526 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 TOP1P11387 765 aaKnown RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 PRG2P13727 222 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 ADRA2CP18825 462 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 GP5P40197 560 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 RABIFP47224 123 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 ATP5OP48047 213 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 SLC1A6P48664 564 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CAPZA1P52907 286 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 BACE1P56817 501 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 PTENP60484 403 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 KBTBD12Q3ZCT8 623 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 VWA2Q5GFL6 755 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CCDC183Q5T5S1 534 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 ZNF770Q6IQ21 691 aaPredicted RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 ISLR2Q6UXK2 745 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 OTOAQ7RTW8 1153 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 TMEM99Q8N816 258 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 OCC1Q8TAD7 63 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 SUN5Q8TC36 379 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CD99L2Q8TCZ2 262 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 RIT1Q92963 219 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 SIPA1Q96FS4 1042 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 RBM14Q96PK6 669 aaKnown RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 FUT8Q9BYC5 575 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 VPS37BQ9H9H4 285 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 UBAP1Q9NZ09 502 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 NINJ2Q9NZG7 142 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 AIPL1Q9NZN9 384 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CLIP2Q9UDT6 1046 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 NIP7Q9Y221 180 aaKnown RBP eCLIP2.49□□□□□ -2.01
CLK1-204ENST00000432425 AKNAQ7Z591 1439 aa2.49□□□□□ -2.01
CLK1-204ENST00000432425 CFAP65Q6ZU64 1925 aaKnown RBP2.49□□□□□ -2.01
CLK1-204ENST00000432425 TMEM94Q12767 1356 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TEX48A0A1B0GUV7 120 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 A0A1W2PQ72 361 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 FAM168BA1KXE4 195 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 HTR3EA5X5Y0 456 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 KRT87PA6NCN2 255 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 UBXN8O00124 270 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 KIF2AO00139 706 aaPredicted RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 B4GAT1O43505 415 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 STX6O43752 255 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SCO2O43819 266 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SEC22BO75396 215 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 GRAP2O75791 330 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 ADCY5O95622 1261 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 FGFR1OPO95684 399 aaKnown RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 LY6G6DO95868 133 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 HMOX1P09601 288 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 ANKRD34CP0C6C1 535 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SUPT20HL2P0C7V6 817 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TSPY4P0CV99 314 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TSPY10P0CW01 314 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 MAPK3P27361 379 aaPredicted RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 SRD5A2P31213 254 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SULT1E1P49888 294 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 GPC3P51654 580 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TKTL1P51854 596 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SLC26A5P58743 744 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 RPS27AP62979 156 aaKnown RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 CCNA1P78396 465 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 NDPQ00604 133 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TYSND1Q2T9J0 566 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 TIMM50Q3ZCQ8 353 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 CAVIN4Q5BKX8 364 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 ARMCX5Q6P1M9 558 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 NUFIP2Q7Z417 695 aaKnown RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 C4orf19Q8IY42 314 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 C11orf42Q8N5U0 333 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 DEPDC1BQ8WUY9 529 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SHC3Q92529 594 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SLC35C1Q96A29 364 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 BPIFA2Q96DR5 249 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 BSCL2Q96G97 398 aaPredicted RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 B3GALT6Q96L58 329 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms