RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SLC5A6Q9Y289 635 aa16.79■□□□□ 0.28
SSR4P1-202ENST00000429427 UNC5CO95185 931 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 STSP08842 583 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 NUDT17P0C025 328 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 KRT15P19012 456 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 KRT4P19013 534 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 TLX1P31314 330 aaPredicted RBP16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 CRHR1P34998 444 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 SOX3P41225 446 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 FOXA1P55317 472 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 PLIN5Q00G26 463 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 SLC18A2Q05940 514 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 MAPKAPK3Q16644 382 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 ZNF750Q32MQ0 723 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 NDUFAF5Q5TEU4 345 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 HIST2H2BCQ6DN03 193 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 ST13P4Q8IZP2 240 aaPredicted RBP16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 CYP4Z2PQ8N1L4 340 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 HORMAD2Q8N7B1 307 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 TMEM178AQ8NBL3 297 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 OR8K3Q8NH51 312 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 AGAP11Q8TF27 550 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 FBXL20Q96IG2 436 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 ACPTQ9BZG2 426 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 PPCSQ9HAB8 311 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 YARS2Q9Y2Z4 477 aaKnown RBP16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 TIMM22Q9Y584 194 aa16.78■□□□□ 0.28
SSR4P1-202ENST00000429427 A0A0G2JMM0 328 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 A0A1W2PPB8 328 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 A0A1W2PRS3 328 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 KIR3DP1A8MWS1 328 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 LRRTM2O43300 516 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CDH16O75309 829 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 SSR4P51571 173 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 RAE1P78406 368 aaKnown RBP16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 C4orf17Q53FE4 359 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CCNYL2Q5T2Q4 361 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 OR52E8Q6IFG1 317 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 WDR93Q6P2C0 686 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 GFRALQ6UXV0 394 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CHERPQ8IWX8 916 aaKnown RBP16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 TMEM156Q8N614 296 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 C1orf52Q8N6N3 182 aaKnown RBP16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CHTF18Q8WVB6 975 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 SEC14L3Q9UDX4 400 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CES1P1Q9UKY3 287 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 CENPEQ02224 2701 aa16.77■□□□□ 0.28
SSR4P1-202ENST00000429427 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
SSR4P1-202ENST00000429427 DIDO1Q9BTC0 2240 aaKnown RBP16.77■□□□□ 0.27
SSR4P1-202ENST00000429427 CROCCQ5TZA2 2017 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 PINLYPA6NC86 204 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 ZNHIT1O43257 154 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 SLU7O95391 586 aaKnown RBP16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 ESRRBO95718 433 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 MLYCDO95822 493 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 CT62P0C5K7 136 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 SLC35E2P0CK97 266 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 MYL2P10916 166 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 COX7A2P14406 83 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 SOX18P35713 384 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 RFC3P40938 356 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 NR0B1P51843 470 aaKnown RBP16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 MAPK12P53778 367 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 PKNOX1P55347 436 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 ERVK-8P63133 956 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 DUSP2Q05923 314 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 C1QL3Q5VWW1 255 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 LYPD8Q6UX82 237 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 FRMD7Q6ZUT3 714 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 SULF2Q8IWU5 870 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 CCNYL1Q8N7R7 359 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 METTL6Q8TCB7 284 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 TM4SF18Q96CE8 201 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 C11orf24Q96F05 449 aaPredicted RBP16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 RBM18Q96H35 190 aaKnown RBP16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 GPR137Q96N19 417 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 VPS29Q9UBQ0 182 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 ERVK-19Q9WJR5 959 aa16.76■□□□□ 0.27
SSR4P1-202ENST00000429427 A1L4Q6 167 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 CLDN1O95832 211 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 KRT6AP02538 564 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 KRT6BP04259 564 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 PTGER1P34995 402 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 KRT6CP48668 564 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 MEOX1P50221 254 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 NAGLUP54802 743 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 SLC37A1P57057 533 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 DNAJB13P59910 316 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 GPR85P60893 370 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 HMGCS1Q01581 520 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 CSTF3Q12996 717 aaKnown RBP16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 ZNF267Q14586 743 aaPredicted RBP16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 CCDC153Q494R4 210 aa16.75■□□□□ 0.27
SSR4P1-202ENST00000429427 SCIMPQ6UWF3 145 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms