RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 KRTAP10-9P60411 292 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 HERVK_113P63132 956 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ERVK-8P63133 956 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 GUCY2DQ02846 1103 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 GTF2H2Q13888 395 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 UBAP2Q5T6F2 1119 aaKnown RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 PRAMEF20Q5VT98 475 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 LIPJQ5W064 366 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 GTF2H2CQ6P1K8 395 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 RGS9BPQ6ZS82 235 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF572Q7Z3I7 529 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 GOLGA7Q7Z5G4 137 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 CCDC91Q7Z6B0 441 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 CCDC71Q8IV32 467 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ZCCHC7Q8N3Z6 543 aaKnown RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 NUBPLQ8TB37 319 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ASB5Q8WWX0 329 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 REPS1Q96D71 796 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 RBM18Q96H35 190 aaKnown RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 FBXL20Q96IG2 436 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 SGCZQ96LD1 299 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ERVK-6Q9BXR3 956 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ENKD1Q9H0I2 346 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 VPS11Q9H270 941 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 IL1RL2Q9HB29 575 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 SEMA4BQ9NPR2 832 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ITGB1BP2Q9UKP3 347 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ERVK-19Q9WJR5 959 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 DCHS2Q6V1P9 2916 aa15.78■□□□□ 0.12
TRIM39-209ENST00000428728 ATP6AP2A0A1C7CYW4 349 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 TMPRSS11DO60235 418 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ATP6AP2O75787 350 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 KLHL2O95198 593 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 NADKO95544 446 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ALDOAP04075 364 aaKnown RBP15.77■□□□□ 0.12
TRIM39-209ENST00000428728 TYK2P29597 1187 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 TLE4Q04727 773 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 PMPCAQ10713 525 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 FOXO1Q12778 655 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF267Q14586 743 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ACAP2Q15057 778 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 MPEG1Q2M385 716 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 PIGGQ5H8A4 983 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF585AQ6P3V2 769 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 CYP20A1Q6UW02 462 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 FAM13CQ8NE31 585 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 TANKQ92844 425 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ZNF717Q9BY31 904 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-209ENST00000428728 UCK2Q9BZX2 261 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 EXO5Q9H790 373 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 IPPKQ9H8X2 491 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 ZDHHC18Q9NUE0 388 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 LYARQ9NX58 379 aaKnown RBP15.77■□□□□ 0.12
TRIM39-209ENST00000428728 RNF11Q9Y3C5 154 aa15.77■□□□□ 0.12
TRIM39-209ENST00000428728 A0A0A6YYD5 115 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 WASHC1A8K0Z3 465 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 H0YIV9 168 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PROM1O43490 865 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 KLK8O60259 260 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 UGDHO60701 494 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 LRATO95237 230 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 AIFM1O95831 613 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 IGHG3P01860 377 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 GBAP04062 536 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 POU3F2P20265 443 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PTX3P26022 381 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ACVR2AP27037 513 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PHBP35232 272 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 BSGP35613 385 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 NEK2P51955 445 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 KCNJ2P63252 427 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 CKAP4Q07065 602 aaKnown RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PCBP2Q15366 365 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ZNF791Q3KP31 576 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 GXYLT1Q4G148 440 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 TECRLQ5HYJ1 363 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 MRM1Q6IN84 353 aaKnown RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 RNF111Q6ZNA4 994 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 TRILQ7L0X0 811 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 SLC29A4Q7RTT9 530 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ST13P4Q8IZP2 240 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PLD6Q8N2A8 252 aaKnown RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 C7orf57Q8NEG2 295 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 SPACA9Q96E40 222 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 C14orf79Q96F83 325 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 CDK15Q96Q40 435 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 PELOQ9BRX2 385 aaKnown RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 LRRC1Q9BTT6 524 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 LDAHQ9H6V9 325 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 NPDC1Q9NQX5 325 aaPredicted RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ZNF358Q9NW07 568 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 NINJ2Q9NZG7 142 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 TSC22D4Q9Y3Q8 395 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ASB4Q9Y574 426 aa15.76■□□□□ 0.11
TRIM39-209ENST00000428728 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.76■□□□□ 0.11
TRIM39-209ENST00000428728 ANKRD17O75179 2603 aaKnown RBP15.75■□□□□ 0.11
TRIM39-209ENST00000428728 IQANK1A0A1B0GTG1 560 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 A0A1W2PR48 441 aa15.75■□□□□ 0.11
TRIM39-209ENST00000428728 CCDC189A1A4V9 331 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms