RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DDAH2O95865 285 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 CST1P01037 141 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HRGP04196 525 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L2P0CJ85 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L3P0CJ86 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L4P0CJ87 422 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L5P0CJ88 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L6P0CJ89 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4L7P0CJ90 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PSME3P61289 254 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF763Q0D2J5 394 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 NFATC3Q12968 1075 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SRSF5Q13243 272 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 CBFBQ13951 182 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SPRED2Q7Z698 418 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 NAXDQ8IW45 347 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 LGI4Q8N135 537 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 OR2A12Q8NGT7 310 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PEX13Q92968 403 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 OXNAD1Q96HP4 312 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FCRL4Q96PJ5 515 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FUCA2Q9BTY2 467 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HOXD1Q9GZZ0 328 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 CRISPLD1Q9H336 500 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 IL37Q9NZH6 218 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DUX4Q9UBX2 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 VDAC3Q9Y277 283 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 GMPPBQ9Y5P6 360 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SNX11Q9Y5W9 270 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TRAV17A0A0B4J275 112 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SULT2B1O00204 365 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PSMD9O00233 223 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 MATN1P21941 496 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ACVR2AP27037 513 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 APLNRP35414 380 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CSNK2A1P68400 391 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CCNIQ14094 377 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 TRMT5Q32P41 509 aaKnown RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ARL13AQ5H913 290 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PTCHD4Q6ZW05 846 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ZER1Q7Z7L7 766 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PROSER1Q86XN7 944 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SLC30A8Q8IWU4 369 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 C19orf47Q8N9M1 422 aaKnown RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 OR52J3Q8NH60 311 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 APOBEC4Q8WW27 367 aaKnown RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 MOAP1Q96BY2 351 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 DNAJA3Q96EY1 480 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 GRHPRQ9UBQ7 328 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 DNAJB11Q9UBS4 358 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 HS3ST2Q9Y278 367 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 KLF13Q9Y2Y9 288 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SH3D21A4FU49 640 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 OR1I1O60431 355 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 KCNK5O95279 499 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 IGLV3-19P01714 112 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 EBLN1P0CF75 366 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 GLB1P16278 677 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CBLP22681 906 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CD40LGP29965 261 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SLC6A4P31645 630 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SRP14P37108 136 aaKnown RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CTSKP43235 329 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SEC24CP53992 1094 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 GMFBP60983 142 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SLC18A2Q05940 514 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 KIF2BQ8N4N8 673 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SLC44A1Q8WWI5 657 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ABTB1Q969K4 478 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 TP53INP1Q96A56 240 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 LRRC58Q96CX6 371 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF597Q96LX8 424 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 NPAS2Q99743 824 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 C9orf16Q9BUW7 83 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 TMEM121BQ9BXQ6 578 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PCDHGB7Q9Y5F8 929 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ELOVL7A1L3X0 281 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SH3PXD2BA1X283 911 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 GGT3PA6NGU5 568 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 YY2O15391 372 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 NRP2O60462 931 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 AK1P00568 194 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 PROCP04070 461 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 LCKP06239 509 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 CHRNGP07510 517 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 FAM58BPP0C7Q3 252 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
CNOT4-206ENST00000428680 ARHGDIBP52566 201 aa6.88□□□□□ -1.31
CNOT4-206ENST00000428680 DNASE1L3Q13609 305 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms