RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PPIBP23284 216 aaKnown RBP15.33■□□□□ 0.04
C9orf3-206ENST00000428313 PBX3P40426 434 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 CSKP41240 450 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 GSTM5P46439 218 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 TSPAN5P62079 268 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 SRSF11Q05519 484 aaKnown RBP15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ATAT1Q5SQI0 421 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 C12orf73Q69YU5 71 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ALKAL1Q6UXT8 129 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ZNF621Q6ZSS3 439 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ASB18Q6ZVZ8 466 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 NLRC3Q7RTR2 1065 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 AQP11Q8NBQ7 271 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 CAMKVQ8NCB2 501 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 MDGA1Q8NFP4 955 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 FCRL1Q96LA6 429 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ACPTQ9BZG2 426 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 ACER3Q9NUN7 267 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 EXTL2Q9UBQ6 330 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 MLXQ9UH92 298 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 YARS2Q9Y2Z4 477 aaKnown RBP15.33■□□□□ 0.04
C9orf3-206ENST00000428313 PCDHB11Q9Y5F2 797 aa15.33■□□□□ 0.04
C9orf3-206ENST00000428313 LOC105369274A0A096LPK9 316 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SMAD6O43541 496 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 LANCL1O43813 399 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SDC1P18827 310 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FABP5Q01469 135 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ST3GAL2Q16842 350 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ZRANB3Q5FWF4 1079 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 RAET1GQ6H3X3 334 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SEZ6L2Q6UXD5 910 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SHFQ7M4L6 423 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 OR4N4Q8N0Y3 316 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 TRPV1Q8NER1 839 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 OR8J1Q8NGP2 316 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 CHFRQ96EP1 664 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SLC38A3Q99624 504 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 PIP5K1AQ99755 562 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ENAMQ9NRM1 1142 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ZNF275Q9NSD4 429 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FAM120CQ9NX05 1096 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 PLCL2Q9UPR0 1127 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 MGAT4BQ9UQ53 548 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 TMEM129A0AVI4 362 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FAM74A7A6NL05 159 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 TAPBPO15533 448 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SSX5O60225 188 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 APOC3P02656 99 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 VTNP04004 478 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 IFNA4P05014 189 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 NR2F6P10588 404 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ELK1P19419 428 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 ZP1P60852 638 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 RPS7P62081 194 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FAM189BP81408 668 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FAM74A3Q4VXF1 159 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 CTU1Q7Z7A3 348 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 UMODL1-AS1Q8N2C9 162 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 UBTD2Q8WUN7 234 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 MRPS24Q96EL2 167 aaKnown RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FCRL2Q96LA5 508 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-206ENST00000428313 KLHL5Q96PQ7 755 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SYT17Q9BSW7 474 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 TPT1P8Q9HAU6 139 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 C11orf16Q9NQ32 467 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 BABAM2Q9NXR7 383 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 FBXL2Q9UKC9 423 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 SPATA2Q9UM82 520 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 MCM3APO60318 1980 aa15.32■□□□□ 0.04
C9orf3-206ENST00000428313 TCRBV16S1A1N1A0A5B0 115 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 D6RAR5 112 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 GNB5O14775 395 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 IRAK2O43187 625 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 SSNA1O43805 119 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 PRMT3O60678 531 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 DRD2P14416 443 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 TACR1P25103 407 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 PSMA3P25788 255 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 XCR1P46094 333 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 TTPAP49638 278 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 UGT8Q16880 541 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 RAB11FIP2Q7L804 512 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 NAXDQ8IW45 347 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 C11orf65Q8NCR3 313 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 OR52I1Q8NGK6 324 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HSD17B8Q92506 261 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 C10orf90Q96M02 699 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 TRIM62Q9BVG3 475 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ACTR6Q9GZN1 396 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ABCG4Q9H172 646 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 RERGLQ9H628 205 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 CYSLTR2Q9NS75 346 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 FZD4Q9ULV1 537 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 NPIPB8E9PQR5 432 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms