RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ALAS2P22557 587 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 CLCN2P51788 898 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 POLE2P56282 527 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 PHC1P78364 1004 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 RAE1P78406 368 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 TGIF1Q15583 401 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SFT2D3Q587I9 215 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 C1orf189Q5VU69 101 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 PAGE2Q7Z2X7 111 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 ADGRG5Q8IZF4 528 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 PACRGLQ8N7B6 248 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 LRTOMTQ8WZ04 291 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 EGLN2Q96KS0 407 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 PHF12Q96QT6 1004 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 PANX1Q96RD7 426 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 DUSP26Q9BV47 211 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SARGQ9BW04 601 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SPATA9Q9BWV2 254 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SPRY4Q9C004 299 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 BHLHE41Q9C0J9 482 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 AKIRIN1Q9H9L7 192 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SLC25A37Q9NYZ2 338 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 DHCR7Q9UBM7 475 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 CHD8Q9HCK8 2581 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 TCRBV5S2A0A599 114 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 MAGEA13PA6NCF6 341 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 DENRO43583 198 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 LRATO95237 230 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 ETHE1O95571 254 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 IL1RNP18510 177 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SNRPNP63162 240 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 GRM7Q14831 915 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 UGT8Q16880 541 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 FAM98BQ52LJ0 330 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 OR4F3Q6IEY1 312 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 ERICH5Q6P6B1 374 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 UNQ6494/PRO21346Q6UXR6 183 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 TTLL10Q6ZVT0 673 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 COMMD6Q7Z4G1 85 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 ASPGQ86U10 573 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SERPINA11Q86U17 422 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 CALHM3Q86XJ0 350 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 MSRB3Q8IXL7 192 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 MICU2Q8IYU8 434 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 RNF175Q8N4F7 328 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 KCT2Q8NC54 265 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 OR10A6Q8NH74 314 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 FGF11Q92914 225 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 TM4SF19Q96DZ7 209 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 THAP11Q96EK4 314 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 FAM120BQ96EK7 910 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 CENPNQ96H22 339 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 CPPED1Q9BRF8 314 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 NDC1Q9BTX1 674 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 B3GNT4Q9C0J1 378 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 REXO4Q9GZR2 422 aaKnown RBP14.76□□□□□ -0.05
SHOX2-202ENST00000425436 REEP4Q9H6H4 257 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 AP1M2Q9Y6Q5 423 aa14.76□□□□□ -0.05
SHOX2-202ENST00000425436 SEC16AO15027 2179 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 GABRR3A8MPY1 467 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 RNASET2O00584 256 aaKnown RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 NDUFS4O43181 175 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 SCN2BO60939 215 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 TGFB1P01137 390 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 HOXB9P17482 250 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 AQP4P55087 323 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 OR4D2P58180 307 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 PLIN5Q00G26 463 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 PRTGQ2VWP7 1150 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 DEPDC1Q5TB30 811 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 FAM199XQ6PEV8 388 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 METTL27Q8N6F8 245 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 TTC29Q8NA56 475 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 CAMKVQ8NCB2 501 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 OR7A2PQ8NGA2 310 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 REXO5Q96IC2 774 aaKnown RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 MYNNQ9NPC7 610 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 AGPAT4Q9NRZ5 378 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 CUTCQ9NTM9 273 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 GMPR2Q9P2T1 348 aaKnown RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 NDOR1Q9UHB4 597 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 PCDHGB4Q9UN71 923 aa14.75□□□□□ -0.05
SHOX2-202ENST00000425436 MRPS2Q9Y399 296 aaKnown RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 TMEM184BQ9Y519 407 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-202ENST00000425436 ZFHX4Q86UP3 3567 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 FITM1A5D6W6 292 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 STMND1H3BQB6 276 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 CPNE3O75131 537 aaKnown RBP14.74□□□□□ -0.05
SHOX2-202ENST00000425436 SH3BGRLO75368 114 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 DLGAP3O95886 979 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 PTPN6P29350 595 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 AHRP35869 848 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 ARFIP1P53367 373 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 WNT3P56703 355 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 CHRNB3Q05901 458 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 BLMHQ13867 455 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 SELPLGQ14242 412 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 FAM214AQ32MH5 1076 aa14.74□□□□□ -0.05
SHOX2-202ENST00000425436 INTS11Q5TA45 600 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms