RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 HMG20BQ9P0W2 317 aa3.85□□□□□ -1.79
RAB3GAP1-202ENST00000425393 TRMT6Q9UJA5 497 aaKnown RBP3.85□□□□□ -1.79
RAB3GAP1-202ENST00000425393 MRPS2Q9Y399 296 aaKnown RBP3.85□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SALL1Q9NSC2 1324 aa3.85□□□□□ -1.79
RAB3GAP1-202ENST00000425393 DHX29Q7Z478 1369 aaKnown RBP3.85□□□□□ -1.79
RAB3GAP1-202ENST00000425393 LOC390937A0A1W2PQ73 354 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SRRM5B3KS81 715 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 DDX39AO00148 427 aaKnown RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 OGTO15294 1046 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 TXNL1O43396 289 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SEMA4FO95754 770 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 PDGFBP01127 241 aaPredicted RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 CALCAP01258 141 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 LYNP07948 512 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 FOSL2P15408 326 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 MTIF2P46199 727 aaKnown RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SLC1A6P48664 564 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 PGFP49763 221 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 KCNK10P57789 538 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 MS4A2Q01362 244 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 TSTA3Q13630 321 aaPredicted RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 ECSCRQ19T08 205 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 RTL3Q8N8U3 475 aaKnown RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 OR6M1Q8NGM8 313 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 OR4A16Q8NH70 328 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 FLVCR1-AS1Q8TAF5 88 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 PCNPQ8WW12 178 aaKnown RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 TCP11Q8WWU5 503 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 RASL10AQ92737 203 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 CDHR1Q96JP9 859 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 GPR137Q96N19 417 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SOSTQ9BQB4 213 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 FAM213AQ9BRX8 229 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 ZCCHC3Q9NUD5 404 aaKnown RBP3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 PIGVQ9NUD9 493 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 TRIM10Q9UDY6 481 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 RARRES3Q9UL19 164 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 SNX5Q9Y5X3 404 aa3.84□□□□□ -1.79
RAB3GAP1-202ENST00000425393 ACOD1A6NK06 481 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 ABHD2P08910 425 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 HMOX1P09601 288 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TPBGLP0DKB5 382 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 UGT1A6P19224 532 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 OXTRP30559 389 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 STIP1P31948 543 aaKnown RBP3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 ALDH3B1P43353 468 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 FCHO2Q0JRZ9 810 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 MPPE1Q53F39 396 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 WDR25Q64LD2 544 aaPredicted RBP3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 RHBDD2Q6NTF9 364 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 RAPH1Q70E73 1250 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 PARP8Q8N3A8 854 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 FGFRL1Q8N441 504 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 POM121L12Q8N7R1 296 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 ZNF781Q8N8C0 355 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 BANPQ8N9N5 519 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 CHDHQ8NE62 594 aaPredicted RBP3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 OR4F5Q8NH21 305 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 P3H4Q92791 437 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 NTNG2Q96CW9 530 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DTD2Q96FN9 168 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 ZNF414Q96IQ9 312 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 JPH2Q9BR39 696 aaPredicted RBP3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 SLC26A1Q9H2B4 701 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DCLRE1BQ9H816 532 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DIMT1Q9UNQ2 313 aaKnown RBP3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 CROCCQ5TZA2 2017 aa3.83□□□□□ -1.8
RAB3GAP1-202ENST00000425393 SHISA9B4DS77 424 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TLR4O00206 839 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 PDHXO00330 501 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TSPAN2O60636 221 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 KERAO60938 352 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 RENP00797 406 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 SFTPBP07988 381 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DNAH10OSP0CZ25 163 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 FOLR2P14207 255 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 HLA-DPA1P20036 260 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 BCL3P20749 454 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TNFRSF4P43489 277 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TKTL1P51854 596 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 CNN1P51911 297 aaKnown RBP3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 RIDAP52758 137 aaKnown RBP3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 LIMK2P53671 638 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 SLC12A3P55017 1021 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 HERV-K104P63124 156 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 UBXN1Q04323 297 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 PCK2Q16822 640 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DCAF12Q5T6F0 453 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 Q6ZRG5 221 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 TIPARPQ7Z3E1 657 aaKnown RBP3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 SLC22A16Q86VW1 577 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 CATSPER3Q86XQ3 398 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 FBXL16Q8N461 479 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 OR1K1Q8NGR3 316 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 RAB39BQ96DA2 213 aa3.82□□□□□ -1.8
RAB3GAP1-202ENST00000425393 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms