RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 C16orf87Q6PH81 154 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 MFN1Q8IWA4 741 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 CD99L2Q8TCZ2 262 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 SLC35B4Q969S0 331 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 TEKT1Q969V4 418 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 C16orf45Q96MC5 204 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 JPH2Q9BR39 696 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 UTP14AQ9BVJ6 771 aaKnown RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 NACAP1Q9BZK3 213 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 TSGA10Q9BZW7 698 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 TRIM7Q9C029 511 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 UBA5Q9GZZ9 404 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 MMADHCQ9H3L0 296 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 UBE2TQ9NPD8 197 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 SPATA7Q9P0W8 599 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ODF2LQ9ULJ1 636 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 BARX2Q9UMQ3 279 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ZFP37Q9Y6Q3 630 aaPredicted RBP2.87□□□□□ -1.95
LINC01040-201ENST00000425048 CECR2Q9BXF3 1484 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ARHGAP35Q9NRY4 1499 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 ELP1O95163 1332 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 CCDC171Q6TFL3 1326 aa2.87□□□□□ -1.95
LINC01040-201ENST00000425048 KDM6BO15054 1643 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NKTRP30414 1462 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 ERCC6Q03468 1493 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 GRIN2AQ12879 1464 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 TCOF1Q13428 1488 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 RPRD2Q5VT52 1461 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 FRG2CA6NGY1 282 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 ZFP92A6NM28 416 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NPIPA3F8WFD2 350 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 PGRMC2O15173 223 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 MAGEB4O15481 346 aaPredicted RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 CPN1P15169 458 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 ACAT1P24752 427 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 PPP2R1AP30153 589 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NF2P35240 595 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 RDXP35241 583 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 GCKP35557 465 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 RANBP1P43487 201 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 FILIP1LQ4L180 1135 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NEPROQ6NW34 567 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 MOXD1Q6UVY6 613 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 IQCA1Q86XH1 822 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 ARL10Q8N8L6 244 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 CLEC1AQ8NC01 280 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 CABS1Q96KC9 395 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 MXD3Q9BW11 206 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 GTPBP2Q9BX10 602 aaKnown RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 FUT8Q9BYC5 575 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 NACA2Q9H009 215 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 FAM107BQ9H098 131 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 AMBNQ9NP70 447 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 CHORDC1Q9UHD1 332 aaPredicted RBP2.86□□□□□ -1.95
LINC01040-201ENST00000425048 KAT6BQ8WYB5 2073 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 TNRQ92752 1358 aa2.86□□□□□ -1.95
LINC01040-201ENST00000425048 MYH7P12883 1935 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 MYH13Q9UKX3 1938 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ITSN2Q9NZM3 1697 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 PTPRKQ15262 1439 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CAMSAP2Q08AD1 1489 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 PRXQ9BXM0 1461 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 MEGF6O75095 1541 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 A0A1B0GUA9 196 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 USP27XA6NNY8 438 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ADAM20O43506 726 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ATP6V1G1O75348 118 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 IGLV1-47P01700 117 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 VDRP11473 427 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CASTP20810 708 aaKnown RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 SYT1P21579 422 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 STIP1P31948 543 aaKnown RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 RGS7P49802 495 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 NDST1P52848 882 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 BTG3Q14201 252 aaPredicted RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 MEA1Q16626 185 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CNPY1Q3B7I2 92 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CCDC158Q5M9N0 1113 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ITPRIPL1Q6GPH6 555 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 KLHL10Q6JEL2 608 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ZSCAN25Q6NSZ9 544 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 SLC27A4Q6P1M0 643 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CLEC4GQ6UXB4 293 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 FAM228AQ86W67 206 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 CROCCP3Q8IVE0 287 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 RNF175Q8N4F7 328 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 FAM81AQ8TBF8 368 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 SYAP1Q96A49 352 aaPredicted RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 FAM122AQ96E09 287 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 PARD6BQ9BYG5 372 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 BLOC1S4Q9NUP1 217 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 KLK12Q9UKR0 248 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 RUVBL2Q9Y230 463 aaKnown RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 RTL1A6NKG5 1358 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 MSH6P52701 1360 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 ANKRD30AQ9BXX3 1397 aa2.85□□□□□ -1.95
LINC01040-201ENST00000425048 SETD1AO15047 1707 aaKnown RBP2.85□□□□□ -1.95
LINC01040-201ENST00000425048 LRRIQ1Q96JM4 1722 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms