RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 UGT1A4P22310 534 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SPRP35270 261 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 EIF1AXP47813 144 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 AFF1P51825 1210 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 EIF3EP60228 445 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 YBX1P67809 324 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ST3GAL4Q11206 333 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SEMA3BQ13214 749 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 KPNB1Q14974 876 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 IRF4Q15306 451 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PTCHD3Q3KNS1 767 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NKAIN1Q4KMZ8 207 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 WASHC2DQ5SRD0 308 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TNFAIP8L2Q6P589 184 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 C6orf89Q6UWU4 347 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ADGRG6Q86SQ4 1221 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FAM217AQ8IXS0 508 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 VWA5B2Q8N398 1253 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR4C13Q8NGP0 309 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR14A16Q8NHC5 309 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC2A12Q8TD20 617 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OXER1Q8TDS5 423 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DDIT4LQ96D03 193 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SORBS1Q9BX66 1292 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 HCAR1Q9BXC0 346 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RAB17Q9H0T7 212 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CWH43Q9H720 699 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF556Q9HAH1 456 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC40A1Q9NP59 571 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ENY2Q9NPA8 101 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ERVK-18Q9QC07 812 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 C2orf78A6NCI8 922 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 K7ENP7 123 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CACNG3O60359 315 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ITGA10O75578 1167 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLCO2B1O94956 709 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RLN1P04808 185 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CD86P42081 329 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ATP12AP54707 1039 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 BTN3A2P78410 334 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 BTKQ06187 659 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MCL1Q07820 350 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MAD2L1Q13257 205 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NAE1Q13564 534 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 AUHQ13825 339 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ACSM3Q53FZ2 586 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FIGNQ5HY92 759 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 EEF1DP3Q658K8 133 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 INO80CQ6PI98 192 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM92Q6UXU6 159 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ARHGAP22Q7Z5H3 698 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC22A15Q8IZD6 547 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PLD6Q8N2A8 252 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SPICQ8N5J4 248 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 COX18Q8N8Q8 333 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZFP41Q8N8Y5 198 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CLEC4DQ8WXI8 215 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SYN2Q92777 582 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ERP27Q96DN0 273 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MSLNLQ96KJ4 702 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZMAT3Q9HA38 289 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PLEKHA1Q9HB21 404 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LHX9Q9NQ69 397 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FSCN3Q9NQT6 498 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 C8orf4Q9NR00 106 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RXFP3Q9NSD7 469 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 IGSF5Q9NSI5 407 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DLGAP4Q9Y2H0 992 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CMAHPQ9Y471 501 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 KLF2Q9Y5W3 355 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LIPGQ9Y5X9 500 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CAPN6Q9Y6Q1 641 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM64CA6NLI5 447 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GNB5O14775 395 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TOX3O15405 576 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ERI3O43414 337 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SSX4O60224 188 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LDB3O75112 727 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 BEST1O76090 585 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CSF1P09603 554 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC25A16P16260 332 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF823P16415 610 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TNFRSF1AP19438 455 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GGT5P36269 586 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MNDAP41218 407 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SOX8P57073 446 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PRPS1P60891 318 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NAA20P61599 178 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MPPED2Q15777 294 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 QPCTQ16769 361 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NT5DC1Q5TFE4 455 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SYDE1Q6ZW31 735 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SPATC1Q76KD6 591 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DPP10Q8N608 796 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PDPRQ8NCN5 879 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR4X2Q8NGF9 303 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms