RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ERVK-11Q9UQG0 969 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 CACNA1CQ13936 2221 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 PINLYPA6NC86 204 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 G3V3Y1 287 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 KLRC4-KLRK1H3BQV0 150 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 HRKO00198 91 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 TMPRSS11DO60235 418 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 UGDHO60701 494 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 SMIM24O75264 130 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 GLRA3O75311 464 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 ESRRAP11474 423 aaPredicted RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 KRT4P19013 534 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 BSGP35613 385 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 STT3AP46977 705 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 NR0B1P51843 470 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 FOLH1Q04609 750 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 SLC18A2Q05940 514 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 CDSNQ15517 529 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 CMPK2Q5EBM0 449 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 SP5Q6BEB4 398 aaPredicted RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 RPTNQ6XPR3 784 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 C3P1Q6ZMU1 363 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 TRABD2AQ86V40 505 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 GPR180Q86V85 440 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 ZFP62Q8NB50 900 aaPredicted RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 OR52B6Q8NGF0 335 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 DOK4Q8TEW6 326 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 ZNF721Q8TF20 911 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 AGAP11Q8TF27 550 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 MARVELD3Q96A59 401 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 PPWD1Q96BP3 646 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 NSUN5Q96P11 429 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 DGAT2Q96PD7 388 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 CENPKQ9BS16 269 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 RPF2Q9H7B2 306 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 NOL11Q9H8H0 719 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 TIMMDC1Q9NPL8 285 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 EMCNQ9ULC0 261 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 TMCO1Q9UM00 188 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 MEMO1Q9Y316 297 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 TNPO3Q9Y5L0 923 aaKnown RBP14.08□□□□□ -0.16
USB1-202ENST00000423271 EML6Q6ZMW3 1958 aa14.08□□□□□ -0.16
USB1-202ENST00000423271 A0A0A6YYD5 115 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 WASHC1A8K0Z3 465 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 A8MT66 165 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 COPEO14579 308 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 CDC40O60508 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
USB1-202ENST00000423271 PRF1P14222 555 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 PTX3P26022 381 aaPredicted RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 CRHR1P34998 444 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 ARL1P40616 181 aaPredicted RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 PHEXP78562 749 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 ZNF750Q32MQ0 723 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 FAM219BQ5XKK7 198 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 MRM1Q6IN84 353 aaKnown RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 BNC2Q6ZN30 1099 aaPredicted RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 RPS27LQ71UM5 84 aaKnown RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 DOLPP1Q86YN1 238 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 C9orf40Q8IXQ3 194 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 GPALPP1Q8IXQ4 340 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 SLC34A3Q8N130 599 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 MYRIPQ8NFW9 859 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 OR8K3Q8NH51 312 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 C16orf52Q8NHV5 167 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 UCN3Q969E3 161 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 REPS1Q96D71 796 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 MTFMTQ96DP5 389 aaKnown RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 C12orf65Q9H3J6 166 aaKnown RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 ZBTB26Q9HCK0 441 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 MS4A12Q9NXJ0 267 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 COPS7AQ9UBW8 275 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 PHF11Q9UIL8 331 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 PCTPQ9UKL6 214 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 ASB4Q9Y574 426 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 KLF2Q9Y5W3 355 aaPredicted RBP14.07□□□□□ -0.16
USB1-202ENST00000423271 DNAJC13O75165 2243 aa14.07□□□□□ -0.16
USB1-202ENST00000423271 A0A1B0GTH9 108 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 A0A1W2PR48 441 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 GLOD5A6NK44 160 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 STX16-NPEPL1H3BU86 382 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 STX16O14662 325 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 ADAM10O14672 748 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 HNRNPRO43390 633 aaKnown RBP14.06□□□□□ -0.16
USB1-202ENST00000423271 PROM1O43490 865 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 CLDN9O95484 217 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 AIFM1O95831 613 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 GBAP04062 536 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 PROCP04070 461 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 IGKV3-11P04433 115 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 NR2F6P10588 404 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 COX7A2P14406 83 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 CCT5P48643 541 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 CCNG1P51959 295 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 PLIN5Q00G26 463 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 TRAF3Q13114 568 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms