RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 OR2Y1Q8NGV0 311 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GRHL3Q8TE85 626 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 FAR1Q8WVX9 515 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ITLN2Q8WWU7 325 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HSPH1Q92598 858 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF503Q96F45 646 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PERPQ96FX8 193 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 IMP4Q96G21 291 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 LINC00615Q96LM1 132 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GBP5Q96PP8 586 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 C17orf62Q9BQA9 187 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF670Q9BS34 389 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HSD3B7Q9H2F3 369 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ACTR5Q9H9F9 607 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MRPL47Q9HD33 250 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 IL26Q9NPH9 171 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 SMOXQ9NWM0 555 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 P4HTMQ9NXG6 502 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 AIPL1Q9NZN9 384 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 COPG2Q9UBF2 871 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 TRIM10Q9UDY6 481 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PADI2Q9Y2J8 665 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF711Q9Y462 761 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 VPS13CQ709C8 3753 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 LOC285095A0A1B0GVY8 99 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 MGAT4DA6NG13 374 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TMCO5BA8MYB1 307 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF487B1APH4 448 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TMEM150CB9EJG8 249 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 C9J4A7 227 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 E7EQ34 232 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CLIC1O00299 241 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF749O43361 778 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SEC14L2O76054 403 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CCNDBP1O95273 360 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ESRRBO95718 433 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 EPOP01588 193 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TPM2P07951 284 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PIRTP0C851 137 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CBSLP0DN79 551 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ST6GAL1P15907 406 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PORP16435 677 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 POLR2CP19387 275 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CYP2A7P20853 494 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PRDX3P30048 256 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 OTX2P32243 289 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CBSP35520 551 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TDGF1P3P51864 188 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 EIF3BP55884 814 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 MRPS35P82673 323 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 EFNB1P98172 346 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PPIDQ08752 370 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZBTB17Q13105 803 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 AIMP2Q13155 320 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TUBA3CQ13748 450 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 GALNT3Q14435 633 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 NFE2L1Q14494 772 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SLC18A3Q16572 532 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF630Q2M218 657 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 AP5B1Q2VPB7 878 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF658BQ4V348 819 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 BCL7AQ4VC05 210 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SLC9B1Q4ZJI4 515 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PCID2Q5JVF3 399 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 LDLRAP1Q5SW96 308 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CCDC122Q5T0U0 273 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZDHHC20Q5W0Z9 365 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 AADACL2Q6P093 401 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 DUS1LQ6P1R4 473 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TUBA3EQ6PEY2 450 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TMEM220Q6QAJ8 160 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 DCDC5Q6ZRR9 648 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 RBM43Q6ZSC3 357 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TMEM200AQ86VY9 491 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 RFX6Q8HWS3 928 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ACBD4Q8NC06 268 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ACVR1CQ8NER5 493 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 OR2L2Q8NH16 312 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PTERQ96BW5 349 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF653Q96CK0 615 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 RMDN2Q96LZ7 410 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 PIP5K1AQ99755 562 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SLC25A51Q9H1U9 297 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TRABDQ9H4I3 376 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 HAUS4Q9H6D7 363 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 FANCEQ9HB96 536 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 IMP3Q9NV31 184 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 SOHLH2Q9NX45 425 aa4.39□□□□□ -1.71
CDC42EP3-202ENST00000422687 IL17CQ9P0M4 197 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms