RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 MRPL19P49406 292 aaKnown RBP7.01□□□□□ -1.29
BDNF-209ENST00000420794 CASP9P55211 416 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 SMIM11AP58511 58 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 FAM53BQ14153 422 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 ZNF267Q14586 743 aaPredicted RBP7.01□□□□□ -1.29
BDNF-209ENST00000420794 ZNF423Q2M1K9 1284 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 RUNDC3AQ59EK9 446 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 PIGGQ5H8A4 983 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 BMP8AQ7Z5Y6 402 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 BPHLQ86WA6 291 aaPredicted RBP7.01□□□□□ -1.29
BDNF-209ENST00000420794 ZNF687Q8N1G0 1237 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 SLC25A45Q8N413 288 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 MIEF2Q96C03 454 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 MVB12AQ96EY5 273 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 NRTNQ99748 197 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 ARPC5LQ9BPX5 153 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 YIPF4Q9BSR8 244 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 KRCC1Q9NPI7 259 aaPredicted RBP7.01□□□□□ -1.29
BDNF-209ENST00000420794 TMEM181Q9P2C4 612 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 STX18Q9P2W9 335 aaKnown RBP7.01□□□□□ -1.29
BDNF-209ENST00000420794 DAPP1Q9UN19 280 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 ATG4BQ9Y4P1 393 aa7.01□□□□□ -1.29
BDNF-209ENST00000420794 EFCAB7A8K855 629 aa7□□□□□ -1.29
BDNF-209ENST00000420794 A8MUA0 341 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TOX3O15405 576 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 MGRN1O60291 552 aa7□□□□□ -1.29
BDNF-209ENST00000420794 CTSVO60911 334 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SCRG1O75711 98 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SERPINA1P01009 418 aa7□□□□□ -1.29
BDNF-209ENST00000420794 CST1P01037 141 aa7□□□□□ -1.29
BDNF-209ENST00000420794 UQCRBP14927 111 aa7□□□□□ -1.29
BDNF-209ENST00000420794 PNLIPP16233 465 aa7□□□□□ -1.29
BDNF-209ENST00000420794 IL12AP29459 219 aa7□□□□□ -1.29
BDNF-209ENST00000420794 RHDQ02161 417 aa7□□□□□ -1.29
BDNF-209ENST00000420794 GPR19Q15760 415 aa7□□□□□ -1.29
BDNF-209ENST00000420794 CLPPQ16740 277 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 VMACQ2NL98 169 aa7□□□□□ -1.29
BDNF-209ENST00000420794 DDX59Q5T1V6 619 aaKnown RBP eCLIP7□□□□□ -1.29
BDNF-209ENST00000420794 FRMPD2BQ6IN97 320 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TMEM107Q6UX40 140 aa7□□□□□ -1.29
BDNF-209ENST00000420794 RBM44Q6ZP01 1051 aaKnown RBP7□□□□□ -1.29
BDNF-209ENST00000420794 LRRC74BQ6ZQY2 392 aa7□□□□□ -1.29
BDNF-209ENST00000420794 PEX5LQ8IYB4 626 aa7□□□□□ -1.29
BDNF-209ENST00000420794 PQLC1Q8N2U9 271 aa7□□□□□ -1.29
BDNF-209ENST00000420794 ZNF555Q8NEP9 628 aa7□□□□□ -1.29
BDNF-209ENST00000420794 OR2I1PQ8NGU4 316 aa7□□□□□ -1.29
BDNF-209ENST00000420794 DNAJC9Q8WXX5 260 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SMOC1Q9H4F8 434 aa7□□□□□ -1.29
BDNF-209ENST00000420794 Q9N2J8 555 aa7□□□□□ -1.29
BDNF-209ENST00000420794 LIPT1Q9Y234 373 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TTC28Q96AY4 2481 aa7□□□□□ -1.29
BDNF-209ENST00000420794 BRCA2P51587 3418 aa7□□□□□ -1.29
BDNF-209ENST00000420794 FAM220BPB1ANY3 271 aa7□□□□□ -1.29
BDNF-209ENST00000420794 NME4O00746 187 aa7□□□□□ -1.29
BDNF-209ENST00000420794 PCDHGA12O60330 932 aa7□□□□□ -1.29
BDNF-209ENST00000420794 GALR3O60755 368 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 CREG1O75629 220 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SLITRK5O94991 958 aa7□□□□□ -1.29
BDNF-209ENST00000420794 NSA2O95478 260 aaKnown RBP7□□□□□ -1.29
BDNF-209ENST00000420794 CD63P08962 238 aa7□□□□□ -1.29
BDNF-209ENST00000420794 ZCCHC18P0CG32 403 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SLC7A1P30825 629 aa7□□□□□ -1.29
BDNF-209ENST00000420794 RAD23AP54725 363 aa7□□□□□ -1.29
BDNF-209ENST00000420794 CCL7P80098 99 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SPEM2Q0P670 501 aa7□□□□□ -1.29
BDNF-209ENST00000420794 NSDHLQ15738 373 aa7□□□□□ -1.29
BDNF-209ENST00000420794 GTDC1Q4AE62 458 aa7□□□□□ -1.29
BDNF-209ENST00000420794 REEP3Q6NUK4 255 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SLC48A1Q6P1K1 146 aa7□□□□□ -1.29
BDNF-209ENST00000420794 WDR74Q6RFH5 385 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 SPRED1Q7Z699 444 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SAP25Q8TEE9 199 aa7□□□□□ -1.29
BDNF-209ENST00000420794 WDR60Q8WVS4 1066 aa7□□□□□ -1.29
BDNF-209ENST00000420794 KAT2AQ92830 837 aa7□□□□□ -1.29
BDNF-209ENST00000420794 RIT1Q92963 219 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TMEM125Q96AQ2 219 aa7□□□□□ -1.29
BDNF-209ENST00000420794 GAL3ST4Q96RP7 486 aa7□□□□□ -1.29
BDNF-209ENST00000420794 ALOXE3Q9BYJ1 711 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SLC39A1Q9NY26 324 aa7□□□□□ -1.29
BDNF-209ENST00000420794 MAP10Q9P2G4 905 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TMA7Q9Y2S6 64 aaKnown RBP7□□□□□ -1.29
BDNF-209ENST00000420794 SLCO1B1Q9Y6L6 691 aa7□□□□□ -1.29
BDNF-209ENST00000420794 KIF26AQ9ULI4 1882 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 EME2A4GXA9 379 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 SAC3D1A6NKF1 404 aa7□□□□□ -1.29
BDNF-209ENST00000420794 AP3D1O14617 1153 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TMPRSS11DO60235 418 aa7□□□□□ -1.29
BDNF-209ENST00000420794 BCHEP06276 602 aa7□□□□□ -1.29
BDNF-209ENST00000420794 RAP2AP10114 183 aa7□□□□□ -1.29
BDNF-209ENST00000420794 CPOXP36551 454 aa7□□□□□ -1.29
BDNF-209ENST00000420794 COPZ1P61923 177 aa7□□□□□ -1.29
BDNF-209ENST00000420794 HBA1P69905 142 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TMED1Q13445 227 aa7□□□□□ -1.29
BDNF-209ENST00000420794 TRA2AQ13595 282 aaKnown RBP eCLIP7□□□□□ -1.29
BDNF-209ENST00000420794 TLR1Q15399 786 aa7□□□□□ -1.29
BDNF-209ENST00000420794 ZXDCQ2QGD7 858 aaPredicted RBP7□□□□□ -1.29
BDNF-209ENST00000420794 WLSQ5T9L3 541 aa7□□□□□ -1.29
BDNF-209ENST00000420794 FAM180BQ6P0A1 224 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SLC29A4Q7RTT9 530 aa7□□□□□ -1.29
BDNF-209ENST00000420794 SFTPA2Q8IWL1 248 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms