RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 OR4F21O95013 312 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 PDYNP01213 254 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 KLK1P06870 262 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 TNFRSF8P28908 595 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 GALNSP34059 522 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SOX3P41225 446 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 PRKAA2P54646 552 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 CASP6P55212 293 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SPRED3Q2MJR0 410 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 CCNYL2Q5T2Q4 361 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 OR52E8Q6IFG1 317 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SLC22A9Q8IVM8 553 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 C16orf52Q8NHV5 167 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 NUBPLQ8TB37 319 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 UBLCP1Q8WVY7 318 aaPredicted RBP15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SREK1Q8WXA9 508 aaKnown RBP15.27■□□□□ 0.04
LINC00404-201ENST00000418660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00404-201ENST00000418660 UCN3Q969E3 161 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 TMEM237Q96Q45 408 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 BRF2Q9HAW0 419 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 FARSBQ9NSD9 589 aaKnown RBP15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00404-201ENST00000418660 NMRK1Q9NWW6 199 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SLC12A4Q9UP95 1085 aa15.27■□□□□ 0.04
LINC00404-201ENST00000418660 SPTAN1Q13813 2472 aaKnown RBP15.27■□□□□ 0.03
LINC00404-201ENST00000418660 DOPEY1Q5JWR5 2465 aa15.27■□□□□ 0.03
LINC00404-201ENST00000418660 A0A1W2PPM1 405 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 HRKO00198 91 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 CCL21O00585 134 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 PGRMC2O15173 223 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 ZG16O60844 167 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 SHBGP04278 402 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 SLC35E2P0CK97 266 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 RASA2Q15283 850 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 MPEG1Q2M385 716 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 PIGGQ5H8A4 983 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 OPN5Q6U736 354 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 BNC2Q6ZN30 1099 aaPredicted RBP15.26■□□□□ 0.03
LINC00404-201ENST00000418660 Q6ZPB1 254 aaPredicted RBP15.26■□□□□ 0.03
LINC00404-201ENST00000418660 SPPL2CQ8IUH8 684 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 GHDCQ8N2G8 530 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 ZFP62Q8NB50 900 aaPredicted RBP15.26■□□□□ 0.03
LINC00404-201ENST00000418660 PSD4Q8NDX1 1056 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 RIT1Q92963 219 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 L3HYPDHQ96EM0 354 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 MAGED4Q96JG8 741 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF382Q96SR6 550 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 CNPPD1Q9BV87 410 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 PPCSQ9HAB8 311 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 TEX10Q9NXF1 929 aaPredicted RBP15.26■□□□□ 0.03
LINC00404-201ENST00000418660 SUCOQ9UBS9 1254 aaKnown RBP15.26■□□□□ 0.03
LINC00404-201ENST00000418660 STK38LQ9Y2H1 464 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 ICE1Q9Y2F5 2266 aa15.26■□□□□ 0.03
LINC00404-201ENST00000418660 ZGRF1Q86YA3 2104 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 MANBAO00462 879 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GLRA3O75311 464 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GUCY1B2O75343 617 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 KRT6AP02538 564 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 KRT6BP04259 564 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 PIK3R1P27986 724 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 KRT6CP48668 564 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GPR85P60893 370 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 ERVK-8P63133 956 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GALNT1Q10472 559 aaPredicted RBP15.25■□□□□ 0.03
LINC00404-201ENST00000418660 TBL3Q12788 808 aaKnown RBP15.25■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF267Q14586 743 aaPredicted RBP15.25■□□□□ 0.03
LINC00404-201ENST00000418660 C3AR1Q16581 482 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 NDUFAF5Q5TEU4 345 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 MTFR2Q6P444 385 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 RTL4Q6ZR62 310 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 SH2D5Q6ZV89 423 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GPRIN3Q6ZVF9 776 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 COMMD6Q7Z4G1 85 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 TDRPQ86YL5 185 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 C9orf40Q8IXQ3 194 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 CDYL2Q8N8U2 506 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 GOLM1Q8NBJ4 401 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 OR4K14Q8NGD5 310 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 CCDC126Q96EE4 140 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 SGCZQ96LD1 299 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 RYDENQ9NUL5 291 aaKnown RBP15.25■□□□□ 0.03
LINC00404-201ENST00000418660 ERVK-19Q9WJR5 959 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 UTP20O75691 2785 aaKnown RBP15.25■□□□□ 0.03
LINC00404-201ENST00000418660 SVILO95425 2214 aa15.25■□□□□ 0.03
LINC00404-201ENST00000418660 OR6C76A6NM76 312 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 TFECO14948 347 aaPredicted RBP15.24■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF354AO60765 605 aaPredicted RBP15.24■□□□□ 0.03
LINC00404-201ENST00000418660 HSD3B1P14060 373 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 HSD3B2P26439 372 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 COL8A1P27658 744 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 RFC3P40938 356 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SLCO1A2P46721 670 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 MAPK12P53778 367 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 PKNOX1P55347 436 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 ASPHQ12797 758 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF750Q32MQ0 723 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 RNF111Q6ZNA4 994 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SLC29A4Q7RTT9 530 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 CHERPQ8IWX8 916 aaKnown RBP15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SLC15A4Q8N697 577 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms