RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 CHRNA10Q9GZZ6 450 aa7.95□□□□□ -1.14
USP54-203ENST00000418501 POLE3Q9NRF9 147 aa7.95□□□□□ -1.14
USP54-203ENST00000418501 KRT84Q9NSB2 600 aa7.95□□□□□ -1.14
USP54-203ENST00000418501 USE1Q9NZ43 259 aa7.95□□□□□ -1.14
USP54-203ENST00000418501 NDOR1Q9UHB4 597 aa7.95□□□□□ -1.14
USP54-203ENST00000418501 TCRBV5S2A0A599 114 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 A6NCN8 305 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 AIFM1O95831 613 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 RHCEP18577 417 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 IGFBP5P24593 272 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CERS1P27544 350 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 ALDH4A1P30038 563 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NR1H2P55055 460 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 WNT3P56703 355 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CRB2Q5IJ48 1285 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 THAP5Q7Z6K1 395 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 UTP15Q8TED0 518 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 NRG4Q8WWG1 115 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TRAPPC9Q96Q05 1148 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 EPYCQ99645 322 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 GMEB2Q9UKD1 530 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SH2B3Q9UQQ2 575 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NUMA1Q14980 2115 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 DOCK8Q8NF50 2099 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 YY2O15391 372 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NUDT21O43809 227 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 UGT2B17O75795 530 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SORBS2O94875 1100 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 SELPLGQ14242 412 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SFT2D3Q587I9 215 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TMEM214Q6NUQ4 689 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 CDK20Q8IZL9 346 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NAGSQ8N159 534 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 ZNF786Q8N393 782 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SVOPQ8N4V2 548 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 DEFB119Q8N690 84 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SPNS1Q9H2V7 528 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 C14orf105Q9NVL8 296 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 A0A0G2JN53 185 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TOX3O15405 576 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 LCMT2O60294 686 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 KLHL18O94889 574 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CCNB2O95067 398 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 GPR75O95800 540 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 LYNP07948 512 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 UGT2B15P54855 530 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 ITGA1P56199 1179 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NUP107P57740 925 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 FAM53BQ14153 422 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TMEM31Q5JXX7 168 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 IER5LQ5T953 404 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TNFAIP8L2Q6P589 184 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 RANBP3LQ86VV4 465 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 BPHLQ86WA6 291 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 CDRT4Q8N9R6 151 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 JPH3Q8WXH2 748 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 Q96MT0 163 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 AMDHD1Q96NU7 426 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 POLR2J2Q9GZM3 115 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 POLR2J3Q9H1A7 115 aaKnown RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 PRDM7Q9NQW5 492 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 PRTFDC1Q9NRG1 225 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 IMPAD1Q9NX62 359 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 LRIT1Q9P2V4 623 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 POFUT2Q9Y2G5 429 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 PIKFYVEQ9Y2I7 2098 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TICRRQ7Z2Z1 1910 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 PIAS2O75928 621 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 IFNA16P05015 189 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 BCHEP06276 602 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 GLB1P16278 677 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CDKN2CP42773 168 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 MC1RQ01726 317 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 SLC13A2Q13183 592 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 NR1D2Q14995 579 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TRIM73Q86UV7 250 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 TMEFF1Q8IYR6 380 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CCL4L1Q8NHW4 92 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP54-203ENST00000418501 GAB3Q8WWW8 586 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 CIDECQ96AQ7 238 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 MENTQ9BUN1 341 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 OR51I1Q9H343 314 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 IL21RQ9HBE5 538 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 GPR27Q9NS67 375 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 PDP1Q9P0J1 537 aaPredicted RBP7.94□□□□□ -1.14
USP54-203ENST00000418501 PADI2Q9Y2J8 665 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 MMACHCQ9Y4U1 282 aa7.94□□□□□ -1.14
USP54-203ENST00000418501 DENND4AQ7Z401 1863 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 TMX2-CTNND1H3BSU7 103 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 EI24O14681 340 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SMNDC1O75940 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP54-203ENST00000418501 CFIP05156 583 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 GSTM3P21266 225 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms