RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SLC22A3O75751 556 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 UFL1O94874 794 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CSPG5O95196 566 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 BAG2O95816 211 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 APOC2P02655 101 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SERPINB2P05120 415 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PRSS1P07477 247 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 BPGMP07738 259 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 UMODP07911 640 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ABCB1P08183 1280 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 FAM58BPP0C7Q3 252 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 KRT5P13647 590 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PAX1P15863 534 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CBLP22681 906 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 GABRA5P31644 462 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SFNP31947 248 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SERPINB6P35237 376 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FDFT1P37268 417 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CDKN2BP42772 138 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 QARSP47897 775 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 ADARP55265 1226 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 GPX6P59796 221 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 RPS18P62269 152 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 FKBP1AP62942 108 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 UBXN2AP68543 259 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CDK3Q00526 305 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CNTN2Q02246 1040 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FOLH1Q04609 750 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CYP24A1Q07973 514 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 OVGP1Q12889 678 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PRKAA1Q13131 559 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 STX3Q13277 289 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DMP1Q13316 513 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 ITPK1Q13572 414 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DPYSQ14117 519 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TFDP1Q14186 410 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TFDP2Q14188 446 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 NR1D2Q14995 579 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PSMD6Q15008 389 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SNAPC1Q16533 368 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TAZQ16635 292 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C9orf50Q5SZB4 431 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C1orf220Q5T0J3 134 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PLA2G4FQ68DD2 849 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TMEM211Q6ICI0 200 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 RWDD4Q6NW29 188 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 TATDN1Q6P1N9 297 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DNAJC24Q6P3W2 148 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TEX38Q6PEX7 206 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DHRS4L2Q6PKH6 230 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FIGLAQ6QHK4 219 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 UGT2A3Q6UWM9 527 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TIFABQ6ZNK6 161 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C15orf39Q6ZRI6 1047 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SH2D5Q6ZV89 423 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 RAPH1Q70E73 1250 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 MIER3Q7Z3K6 550 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ARPINQ7Z6K5 226 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ANKRD23Q86SG2 305 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ADIPOR2Q86V24 386 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ERI1Q8IV48 349 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 NUDCD3Q8IVD9 361 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DCUN1D3Q8IWE4 304 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C4orf19Q8IY42 314 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DAW1Q8N136 415 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CRYBG2Q8N1P7 616 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FBXW8Q8N3Y1 598 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 L3MBTL4Q8NA19 623 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ZBTB8BQ8NAP8 495 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 POMGNT2Q8NAT1 580 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TMEM35BQ8NCS4 154 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FBXO36Q8NEA4 188 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 OR2AJ1Q8NGZ0 328 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CHURC1Q8WUH1 139 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SNRNP27Q8WVK2 155 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 DNASE2BQ8WZ79 361 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 TOP1MTQ969P6 601 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SGF29Q96ES7 293 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 RILPQ96NA2 401 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DGAT2Q96PD7 388 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FAM111AQ96PZ2 611 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 CBWD1Q9BRT8 395 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ZNF577Q9BSK1 485 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C16orf70Q9BSU1 422 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 THTPAQ9BU02 230 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ABHD6Q9BV23 337 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FNDC11Q9BVV2 318 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FAM124BQ9H5Z6 455 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 PLGRKTQ9HBL7 147 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ZBTB20Q9HC78 741 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 XAB2Q9HCS7 855 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 PALMDQ9NP74 551 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C8orf4Q9NR00 106 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 FBXO6Q9NRD1 293 aaPredicted RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 FAIMQ9NVQ4 179 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 NKIRAS2Q9NYR9 191 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PAK5Q9P286 719 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SLC17A7Q9P2U7 560 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 EPS15L1Q9UBC2 864 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 XPO7Q9UIA9 1087 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms