RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MYL6P60660 151 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RPS18P62269 152 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ESRRGP62508 458 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RPS21P63220 83 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CSNK2BP67870 215 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TXNL4AP83876 142 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TFAMQ00059 246 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 BTKQ06187 659 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GALNT2Q10471 571 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 BST2Q10589 180 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 MYBPHQ13203 477 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DAG1Q14118 895 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RFTN1Q14699 578 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TAF5Q15542 800 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CALCRLQ16602 461 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CYP2A13Q16696 494 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 UGP2Q16851 508 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PFKFB4Q16877 469 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 VMACQ2NL98 169 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZBED5Q49AG3 693 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF385BQ569K4 471 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 KLHDC7AQ5VTJ3 777 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 UGT3A1Q6NUS8 523 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CCDC137Q6PK04 289 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM207Q6UWW9 146 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PAMR1Q6UXH9 720 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GFRALQ6UXV0 394 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PLEKHG7Q6ZR37 379 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GPRIN3Q6ZVF9 776 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 MED25Q71SY5 747 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZER1Q7Z7L7 766 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 LRRC6Q86X45 466 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 WDR49Q8IV35 697 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CIARTQ8N365 385 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TBC1D19Q8N5T2 526 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ARFGAP1Q8N6T3 406 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 BCORP1Q8N888 145 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 NAT8LQ8N9F0 302 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 LINC01356Q8N9X3 169 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ICA1LQ8NDH6 482 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SRFBP1Q8NEF9 429 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DENND6BQ8NEG7 585 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TMIEQ8NEW7 156 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 OR10H5Q8NGA6 315 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CAPSLQ8WWF8 208 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 LARP4BQ92615 738 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 UFD1Q92890 307 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 MCUR1Q96AQ8 359 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 C18orf8Q96DM3 657 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PTCD3Q96EY7 689 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SMARCD1Q96GM5 515 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 LMLNQ96KR4 655 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CAPZA3Q96KX2 299 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 LENG8Q96PV6 779 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 KLF6Q99612 283 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DDX50Q9BQ39 737 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 WDR77Q9BQA1 342 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 NDC1Q9BTX1 674 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 MRI1Q9BV20 369 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 POLDIP3Q9BY77 421 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RNF26Q9BY78 433 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 AMBRA1Q9C0C7 1298 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PPA2Q9H2U2 334 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GHITMQ9H3K2 345 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TFB2MQ9H5Q4 396 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZDHHC6Q9H6R6 413 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF556Q9HAH1 456 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SMURF2Q9HAU4 748 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 NMUR1Q9HB89 426 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CRLF2Q9HC73 371 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DYRK4Q9NR20 520 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GIMAP4Q9NUV9 329 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PKD2L2Q9NZM6 624 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SLCO3A1Q9UIG8 710 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DAPK2Q9UIK4 370 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ENPP5Q9UJA9 477 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ITGA11Q9UKX5 1188 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 INTS6Q9UL03 887 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 GTF2A1LQ9UNN4 478 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SCML2Q9UQR0 700 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 HIVEP2P31629 2446 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ZGRF1Q86YA3 2104 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 NBEAL2Q6ZNJ1 2754 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 LINC00862A6NCI5 91 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 OR6C74A6NCV1 312 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 MROH6A6NGR9 719 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 LRRC53A6NM62 1247 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 BTNL10A8MVZ5 291 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 C2orf74A8MZ97 194 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 CLDN25C9JDP6 229 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 H0YCG3 227 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 H3BMM5 538 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 NDUFS8O00217 210 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 PSMD11O00231 422 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 PIP5K1CO60331 668 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 UGT1A9O60656 530 aa5.2□□□□□ -1.58
ECHDC1-206ENST00000417628 TBL1XO60907 577 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms