RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBXN4-203ENST00000416538 SNRPB2P08579 225 aaKnown RBP13.97□□□□□ -0.17
UBXN4-203ENST00000416538 TNNI3P19429 210 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 CASP6P55212 293 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 EMC4Q5J8M3 183 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 MTFR2Q6P444 385 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 KLC3Q6P597 504 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 CD163Q86VB7 1156 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 OR8K3Q8NH51 312 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 SENP5Q96HI0 755 aaPredicted RBP13.97□□□□□ -0.17
UBXN4-203ENST00000416538 DGAT2Q96PD7 388 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 TTTY12Q9BZ98 90 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 DDX31Q9H8H2 851 aaKnown RBP13.97□□□□□ -0.17
UBXN4-203ENST00000416538 PRM3Q9NNZ6 103 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 TIMMDC1Q9NPL8 285 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 SEMA4BQ9NPR2 832 aaPredicted RBP13.97□□□□□ -0.17
UBXN4-203ENST00000416538 ADGRE2Q9UHX3 823 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 PHF11Q9UIL8 331 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 SPACA6W5XKT8 324 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 DCHS2Q6V1P9 2916 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 ADGRG4Q8IZF6 3080 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 STX16-NPEPL1H3BU86 382 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 STX16O14662 325 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 PDE9AO76083 593 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 CELA3AP09093 270 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 NR2F6P10588 404 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ESRRAP11474 423 aaPredicted RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 TSPAN8P19075 237 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 DNASE1L1P49184 302 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 HERVK_113P63132 956 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ERVK-8P63133 956 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 PLIN5Q00G26 463 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 FOXO1Q12778 655 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ASPHQ12797 758 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 CUL3Q13618 768 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 MCEMP1Q8IX19 187 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 GPALPP1Q8IXQ4 340 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 FAM57AQ8TBR7 257 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 PHF10Q8WUB8 498 aaKnown RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 MTFMTQ96DP5 389 aaKnown RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 FBXL20Q96IG2 436 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 NTMT1Q9BV86 223 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ERVK-6Q9BXR3 956 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ZDHHC11Q9H8X9 412 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 SH2D2AQ9NP31 389 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 FARSBQ9NSD9 589 aaKnown RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF225Q9UK10 706 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 PPT2Q9UMR5 302 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 ERVK-19Q9WJR5 959 aa13.96□□□□□ -0.17
UBXN4-203ENST00000416538 TNPO3Q9Y5L0 923 aaKnown RBP13.96□□□□□ -0.17
UBXN4-203ENST00000416538 A8MT66 165 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 FOXE1O00358 373 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 PGRMC2O15173 223 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 CLDN9O95484 217 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 TPOP07202 933 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 FAM58BPP0C7Q3 252 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ALOX15P16050 662 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 PTX3P26022 381 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 PTGS2P35354 604 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 KIR3DL1P43629 444 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 SERPINB9P50453 376 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ARFIP1P53367 373 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 SPRED3Q2MJR0 410 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF791Q3KP31 576 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 LETMD1Q6P1Q0 360 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 XKRXQ6PP77 449 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 RTL4Q6ZR62 310 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 NUDT13Q86X67 352 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 SRRM1Q8IYB3 904 aaKnown RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ST13P4Q8IZP2 240 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 MMP21Q8N119 569 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 TMEM251Q8N6I4 163 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 LRRN4CLQ8ND94 238 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 OR4F6Q8NGB9 312 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF483Q8TF39 744 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 REPS1Q96D71 796 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 CNPPD1Q9BV87 410 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 TRIM8Q9BZR9 551 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 EPB41L4BQ9H329 900 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 LYARQ9NX58 379 aaKnown RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 MS4A12Q9NXJ0 267 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 TUBA8Q9NY65 449 aaPredicted RBP13.95□□□□□ -0.18
UBXN4-203ENST00000416538 COPS7AQ9UBW8 275 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF180Q9UJW8 692 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 NFU1Q9UMS0 254 aa13.95□□□□□ -0.18
UBXN4-203ENST00000416538 E9PLN8 166 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 SEMA3DO95025 777 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 LRATO95237 230 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 GPR75O95800 540 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 RBP1P09455 135 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 CT62P0C5K7 136 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 COX7A2P14406 83 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 AGAP20933 346 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms