RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 E2F2Q14209 437 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 SH2D4BQ5SQS7 431 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 GRHL2Q6ISB3 625 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 MED27Q6P2C8 311 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 TMIGD1Q6UXZ0 262 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 FAM47EQ6ZV65 393 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 ACAD11Q709F0 780 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 ADCK2Q7Z695 626 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 TMPRSS11BQ86T26 416 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 HORMAD2Q8N7B1 307 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 TTLQ8NG68 377 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 THAP11Q96EK4 314 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 PRAP1Q96NZ9 151 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZNF317Q96PQ6 595 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 SORT1Q99523 831 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 DPH7Q9BTV6 452 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZNF304Q9HCX3 659 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 KLHL1Q9NR64 748 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 HCFC1P51610 2035 aa12.66□□□□□ -0.38
RAPGEF1-204ENST00000414781 GTF3C1Q12789 2109 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 IGLV3-12A0A075B6K2 115 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 FITM1A5D6W6 292 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 PPP6CO00743 305 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 HDAC3O15379 428 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 LYPLA1O75608 230 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 OR4F21O95013 312 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TPOP07202 933 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 CELA2AP08217 269 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 PEBP1P30086 187 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 GRIA3P42263 894 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TUBA3CQ13748 450 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 OR1C1Q15619 314 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 CPSF6Q16630 551 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZC3H12BQ5HYM0 836 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 CATSPEREQ5SY80 951 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TUBA3EQ6PEY2 450 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ARSKQ6UWY0 536 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 RPS27LQ71UM5 84 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 FGD2Q7Z6J4 655 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 PRSS58Q8IYP2 241 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZNF781Q8N8C0 355 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 CDYL2Q8N8U2 506 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 NRTNQ99748 197 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 UTP23Q9BRU9 249 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TUBB6Q9BUF5 446 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 SHCBP1LQ9BZQ2 653 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 C20orf27Q9GZN8 174 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZNF700Q9H0M5 742 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 C14orf105Q9NVL8 296 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 ZDHHC2Q9UIJ5 367 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 RNF11Q9Y3C5 154 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 TSC22D4Q9Y3Q8 395 aa12.65□□□□□ -0.38
RAPGEF1-204ENST00000414781 CPAMD8Q8IZJ3 1885 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 TRBC2A0A5B9 178 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 INAFM1C9JVW0 142 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 EZRP15311 586 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 PSMB5P28074 263 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 KIR2DL3P43628 341 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 RPS15AP62244 130 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 ACER2Q5QJU3 275 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 KANK2Q63ZY3 851 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 FRG2Q64ET8 278 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 LETMD1Q6P1Q0 360 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 FIGLAQ6QHK4 219 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 RNF165Q6ZSG1 346 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 CHSY3Q70JA7 882 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 METTL27Q8N6F8 245 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 ZNF285Q96NJ3 590 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 CDK15Q96Q40 435 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 FRG2BQ96QU4 278 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 BEX4Q9NWD9 120 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 PSD3Q9NYI0 1048 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 MAU2Q9Y6X3 613 aa12.64□□□□□ -0.39
RAPGEF1-204ENST00000414781 KCNE1BA0A087WTH5 132 aa12.63□□□□□ -0.39
RAPGEF1-204ENST00000414781 ANKDD1BA6NHY2 528 aa12.63□□□□□ -0.39
RAPGEF1-204ENST00000414781 A6NNC1 897 aa12.63□□□□□ -0.39
RAPGEF1-204ENST00000414781 SLC28A1O00337 649 aa12.63□□□□□ -0.39
RAPGEF1-204ENST00000414781 ZNHIT1O43257 154 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms