RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SLC25A23Q9BV35 468 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 NLNQ9BYT8 704 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 SLAMF8Q9P0V8 285 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 TMEM184BQ9Y519 407 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 A0A1W2PP18 115 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 A0A1W2PR48 441 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 FITM1A5D6W6 292 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 CCDC154A6NI56 674 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 BCAS2O75934 225 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 FURINP09958 794 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 MSL3P1P0C860 447 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 COX7A2P14406 83 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 TSFMP43897 325 aaKnown RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 ALDH9A1P49189 494 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 ARFIP1P53367 373 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 ESRRGP62508 458 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 INSM1Q01101 510 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 FOXM1Q08050 763 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 TRIP6Q15654 476 aaKnown RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 NDUFAF5Q5TEU4 345 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 REP15Q6BDI9 236 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 OR4F3Q6IEY1 312 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 SLC2A7Q6PXP3 512 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 ANKRD46Q86W74 232 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 DSELQ8IZU8 1212 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 TESCQ96BS2 214 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 APMAPQ9HDC9 416 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 SIDT1Q9NXL6 827 aaKnown RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 TUBA8Q9NY65 449 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 KCMF1Q9P0J7 381 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 MAP10Q9P2G4 905 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 DHCR7Q9UBM7 475 aaKnown RBP14.66□□□□□ -0.06
SHMT2-202ENST00000414700 PACSIN3Q9UKS6 424 aa14.66□□□□□ -0.06
SHMT2-202ENST00000414700 RDH16O75452 317 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 RFPL3O75679 317 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 TIAF1O95411 115 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 TFPTP0C1Z6 253 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 C21orf58P58505 322 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 MAPRE2Q15555 327 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CLPPQ16740 277 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-202ENST00000414700 MPEG1Q2M385 716 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ZBED5Q49AG3 693 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CLVS1Q8IUQ0 354 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-202ENST00000414700 FAM9CQ8IZT9 166 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 GLB1L3Q8NCI6 653 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-202ENST00000414700 SERINC2Q96SA4 455 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CDRT15Q96T59 188 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CSF3RQ99062 836 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ZBTB18Q99592 522 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 REEP4Q9H6H4 257 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 SH3BP4Q9P0V3 963 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 NDUFAF1Q9Y375 327 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 PGRMC2O15173 223 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 PRMT3O60678 531 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 AIFM1O95831 613 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ME2P23368 584 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 GCGRP47871 477 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 LIM2P55344 173 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ITGA1P56199 1179 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 WNT3P56703 355 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 PDE7AQ13946 482 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 GRM7Q14831 915 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 BCL2A1Q16548 175 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 KRT80Q6KB66 452 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 NIPAL1Q6NVV3 410 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 DHRS13Q6UX07 377 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 TTLL10Q6ZVT0 673 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 SLCO6A1Q86UG4 719 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 GPR135Q8IZ08 494 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CIDECQ96AQ7 238 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-202ENST00000414700 EME1Q96AY2 570 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 OR52E6Q96RD3 313 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 SLC39A3Q9BRY0 314 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 CLK4Q9HAZ1 481 aaKnown RBP14.65□□□□□ -0.06
SHMT2-202ENST00000414700 IL1RL2Q9HB29 575 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ANKHQ9HCJ1 492 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 DAPP1Q9UN19 280 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 ERVK-11Q9UQG0 969 aa14.65□□□□□ -0.06
SHMT2-202ENST00000414700 C7orf72A4D263 438 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 TRIM64CA6NLI5 447 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 MRASO14807 208 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 ANGPT2O15123 496 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 ZNF749O43361 778 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 PROM1O43490 865 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 B3GALT2O43825 422 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 CCL4P13236 92 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 DDCP20711 480 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 MAT1AQ00266 395 aaKnown RBP14.64□□□□□ -0.07
SHMT2-202ENST00000414700 STX5Q13190 355 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 CEACAM7Q14002 265 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 SYT16Q17RD7 645 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 IKBIPQ70UQ0 350 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 PGAM4Q8N0Y7 254 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 C12orf43Q96C57 262 aaKnown RBP14.64□□□□□ -0.07
SHMT2-202ENST00000414700 PLEKHA8Q96JA3 519 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 CTRCQ99895 268 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 NEURL2Q9BR09 285 aa14.64□□□□□ -0.07
SHMT2-202ENST00000414700 PAIP1Q9H074 479 aaKnown RBP14.64□□□□□ -0.07
SHMT2-202ENST00000414700 PALMDQ9NP74 551 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms