RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ACSM2AQ08AH3 577 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 FUT7Q11130 342 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 DDX39BQ13838 428 aaKnown RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 SF3B4Q15427 424 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP54-202ENST00000413442 OR1C1Q15619 314 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 IGFBP7Q16270 282 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 HYAL4Q2M3T9 481 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 SMU1Q2TAY7 513 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 C4orf17Q53FE4 359 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 FBXO48Q5FWF7 155 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 PIGGQ5H8A4 983 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 NDUFAF5Q5TEU4 345 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 CROCCQ5TZA2 2017 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 ACSM2BQ68CK6 577 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 SLC48A1Q6P1K1 146 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 TMEM81Q6P7N7 255 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 ZNF793Q6ZN11 406 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 RTL4Q6ZR62 310 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 IKBIPQ70UQ0 350 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 TRABD2AQ86V40 505 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 LRRC34Q8IZ02 419 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 FAM9CQ8IZT9 166 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 CLYBLQ8N0X4 340 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 TAGAPQ8N103 731 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 SLC34A3Q8N130 599 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 BEST3Q8N1M1 668 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 BANPQ8N9N5 519 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 ZFP62Q8NB50 900 aaPredicted RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 CATSPER1Q8NEC5 780 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 ZNF721Q8TF20 911 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 AENQ8WTP8 325 aaKnown RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 SSC4DQ8WTU2 575 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 RIT1Q92963 219 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 TSLPQ969D9 159 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 HSPBAP1Q96EW2 488 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 ZNF764Q96H86 408 aaPredicted RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 ZNF717Q9BY31 904 aaPredicted RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 RUBCNLQ9H714 662 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 GIMAP4Q9NUV9 329 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 HPF1Q9NWY4 346 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 QPCTLQ9NXS2 382 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 MAP10Q9P2G4 905 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 PRODH2Q9UF12 536 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 FBXW2Q9UKT8 454 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 SLC12A4Q9UP95 1085 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.95□□□□□ -1.46
USP54-202ENST00000413442 ATG4BQ9Y4P1 393 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 PCDHGB3Q9Y5G1 929 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 PCDHA9Q9Y5H5 950 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 CFAP46Q8IYW2 2715 aa5.95□□□□□ -1.46
USP54-202ENST00000413442 SHANK1Q9Y566 2161 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 IGHV3-20A0A0C4DH32 117 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TRBV11-1A0A0K0K1C0 115 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 A0A1W2PR48 441 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TLDC2A0PJX2 215 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 OR14I1A6ND48 311 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 OR2W5A6NFC9 320 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 C4orf51C9J302 202 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 MANBAO00462 879 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TP53I11O14683 189 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ACOX3O15254 700 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TM9SF1O15321 606 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 BIRC5O15392 142 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CTIFO43310 598 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 RGS14O43566 566 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ASNA1O43681 348 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 FGF17O60258 216 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 OR10H2O60403 315 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TBX19O60806 448 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 LDB3O75112 727 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CRCPO75575 148 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SLC25A12O75746 678 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 RSL1D1O76021 490 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 AGFG2O95081 481 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SNX4O95219 450 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 B3GALT4O96024 378 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 KLK1P06870 262 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 DRD5P21918 477 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 XKP51811 444 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 NEK2P51955 445 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CDH13P55290 713 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 FOXL2P58012 376 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 VSNL1P62760 191 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SNRPNP63162 240 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 MRPS22P82650 360 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 ALDH6A1Q02252 535 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 FOLH1Q04609 750 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SNTA1Q13424 505 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CEBPEQ15744 281 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 MAPKAPK3Q16644 382 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 HLA-DQA1Q5Y7H0 255 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SLC22A10Q63ZE4 541 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 LETMD1Q6P1Q0 360 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 XKRXQ6PP77 449 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 LRIG3Q6UXM1 1119 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 RNF111Q6ZNA4 994 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 Q6ZPB1 254 aaPredicted RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 GK5Q6ZS86 529 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 FRMD7Q6ZUT3 714 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms