RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ALDH1A1P00352 501 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SERPINA3P01011 423 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RFX3P48380 749 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 METTL2BQ6P1Q9 378 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SYT14Q8NB59 555 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CAMK1GQ96NX5 476 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ERVMER34-1Q9H9K5 563 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC39A1Q9NY26 324 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RAF1P04049 648 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 ALPPP05187 535 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 HLA-EP13747 358 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 TAS2R50P59544 299 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 TEKQ02763 1124 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 ZDHHC20Q5W0Z9 365 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 LRRN1Q6UXK5 716 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 KLBQ86Z14 1044 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 PDLIM5Q96HC4 596 aaKnown RBP13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 ZIC5Q96T25 663 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 OR51V1Q9H2C8 321 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 RBPJLQ9UBG7 517 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC23A1Q9UHI7 598 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 BTNL2Q9UIR0 455 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 NXPE1Q8N323 547 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 ISG20Q96AZ6 181 aaKnown RBP13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF416Q9BWM5 594 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 BOCQ9BWV1 1114 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 EDARQ9UNE0 448 aa13.27□□□□□ -0.28
CLTCL1-201ENST00000412649 J3KTA2 159 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 ITGA10O75578 1167 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 TFP02787 698 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 ALDOBP05062 364 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 GPX2P18283 190 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 TIA1P31483 386 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 FNTBP49356 437 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 CRISP3P54108 245 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 LRRC32Q14392 662 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 PLK5Q496M5 336 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 CDONQ4KMG0 1287 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 SLC22A10Q63ZE4 541 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 RAB8BQ92930 207 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 UQCC2Q9BRT2 126 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 GSX2Q9BZM3 304 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 NDUFAF4Q9P032 175 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 GOLGA4Q13439 2230 aaKnown RBP13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 PTGESO14684 152 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 RGS9O75916 674 aaPredicted RBP13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 KLK1P06870 262 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 WDR5P61964 334 aaKnown RBP13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 BEST4Q8NFU0 473 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 GTF2A1LQ9UNN4 478 aa13.27□□□□□ -0.29
CLTCL1-201ENST00000412649 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 DISC1C4P0D8 188 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 PDHXO00330 501 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 HOXC5Q00444 222 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ELAVL2Q12926 359 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 DUSP4Q13115 394 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 SLBPQ14493 270 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF791Q3KP31 576 aaPredicted RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 LEXMQ3ZCV2 418 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 MOSPD2Q8NHP6 518 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 TSNAXQ99598 290 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 TRIP11Q15643 1979 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 UNCXA6NJT0 531 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OR6C75A6NL08 312 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 GIFP27352 417 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 TGM4P49221 684 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 BTG1P62324 171 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 RPS25P62851 125 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 DDX53Q86TM3 631 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 METTL3Q86U44 580 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CFAP206Q8IYR0 622 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OR51G2Q8NGK0 314 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OPALINQ96PE5 141 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 MGME1Q9BQP7 344 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 BHLHE41Q9C0J9 482 aaPredicted RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 RLIMQ9NVW2 624 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms