RNA–Protein interactions for RNA: ENST00000410084.7

CAB39-203, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 1,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-203ENST00000410084 STAG3L4Q8TBR4 150 aa17.31■□□□□ 0.36
CAB39-203ENST00000410084 RGMAQ96B86 450 aa17.31■□□□□ 0.36
CAB39-203ENST00000410084 RMND5BQ96G75 393 aaPredicted RBP17.31■□□□□ 0.36
CAB39-203ENST00000410084 JSRP1Q96MG2 331 aaPredicted RBP17.31■□□□□ 0.36
CAB39-203ENST00000410084 CPNE1Q99829 537 aa17.31■□□□□ 0.36
CAB39-203ENST00000410084 CXXC4Q9H2H0 198 aa17.31■□□□□ 0.36
CAB39-203ENST00000410084 CLEC4MQ9H2X3 399 aaPredicted RBP17.31■□□□□ 0.36
CAB39-203ENST00000410084 ACKR4Q9NPB9 350 aa17.31■□□□□ 0.36
CAB39-203ENST00000410084 SAP18O00422 153 aaKnown RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 SYT5O00445 386 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 DVL2O14641 736 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 PIAS1O75925 651 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 IGKV3-11P04433 115 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 DNASE1P24855 282 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 IGLV3-21P80748 117 aaPredicted RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 PRAMEF20Q5VT98 475 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 GPR180Q86V85 440 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 TGIF2LYQ8IUE0 185 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 OR7G3Q8NG95 312 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 EXT2Q93063 718 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 PPWD1Q96BP3 646 aaKnown RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 POM121Q96HA1 1249 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 FBXL20Q96IG2 436 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 GAL3ST4Q96RP7 486 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 PELOQ9BRX2 385 aaKnown RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 ZNF703Q9H7S9 590 aaPredicted RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 SH2D2AQ9NP31 389 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 TRMT1Q9NXH9 659 aaKnown RBP17.3■□□□□ 0.36
CAB39-203ENST00000410084 SPRR3Q9UBC9 169 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 OPTCQ9UBM4 332 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 PHF11Q9UIL8 331 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 ST6GALNAC2Q9UJ37 374 aa17.3■□□□□ 0.36
CAB39-203ENST00000410084 AHRRA9YTQ3 701 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 CCDC188H7C350 402 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 RFPL3SP0C7P2 107 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 ALOX15P16050 662 aaPredicted RBP17.29■□□□□ 0.36
CAB39-203ENST00000410084 BUD31P41223 144 aaPredicted RBP17.29■□□□□ 0.36
CAB39-203ENST00000410084 RAB10P61026 200 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 E2F2Q14209 437 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 SF3B4Q15427 424 aaKnown RBP eCLIP17.29■□□□□ 0.364e-7■■■■□ 22.1
CAB39-203ENST00000410084 DEPDC1Q5TB30 811 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 ULK2Q8IYT8 1036 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 ST13P4Q8IZP2 240 aaPredicted RBP17.29■□□□□ 0.36
CAB39-203ENST00000410084 LRRC25Q8N386 305 aaPredicted RBP17.29■□□□□ 0.36
CAB39-203ENST00000410084 NEIL3Q8TAT5 605 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 GPR22Q99680 433 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 RBBP8Q99708 897 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 GPATCH1Q9BRR8 931 aaKnown RBP17.29■□□□□ 0.36
CAB39-203ENST00000410084 DOHHQ9BU89 302 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 OR51B5Q9H339 312 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 SMYD2Q9NRG4 433 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 RASSF1Q9NS23 344 aa17.29■□□□□ 0.36
CAB39-203ENST00000410084 NIPBLQ6KC79 2804 aaeCLIP17.29■□□□□ 0.362e-7■□□□□ 8.6
CAB39-203ENST00000410084 CAPN14A8MX76 684 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 TP73O15350 636 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 OR10H2O60403 315 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 EPORP19235 508 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 ENDOUP21128 410 aaKnown RBP17.28■□□□□ 0.36
CAB39-203ENST00000410084 SSTR1P30872 391 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 GP5P40197 560 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 PAFAH1B1P43034 410 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
CAB39-203ENST00000410084 CBLBQ13191 982 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 DDX39BQ13838 428 aaKnown RBP17.28■□□□□ 0.36
CAB39-203ENST00000410084 TBCELQ5QJ74 424 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 TMEM198Q66K66 360 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 RNF111Q6ZNA4 994 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 RAPH1Q70E73 1250 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 CREG2Q8IUH2 290 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 TAGAPQ8N103 731 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 ALG9Q9H6U8 611 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 NMRAL1Q9HBL8 299 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 NUDT4Q9NZJ9 180 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 CRIM1Q9NZV1 1036 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 MTRF1LQ9UGC7 380 aaKnown RBP17.28■□□□□ 0.36
CAB39-203ENST00000410084 FOXD3Q9UJU5 478 aaPredicted RBP17.28■□□□□ 0.36
CAB39-203ENST00000410084 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
CAB39-203ENST00000410084 C15orf38-AP3S2A0A0A6YYH1 394 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 OR6C76A6NM76 312 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.36
CAB39-203ENST00000410084 K7EPI3 171 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 TP53I11O14683 189 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 FBXO45P0C2W1 286 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 EPB42P16452 691 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 KLK2P20151 261 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 BMP5P22003 454 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 GDF1P27539 372 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 SPRP35270 261 aaPredicted RBP17.27■□□□□ 0.36
CAB39-203ENST00000410084 PIK3CBP42338 1070 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 TRPC1P48995 793 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 ARFIP1P53367 373 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 HERVK_113P63132 956 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 ERVK-8P63133 956 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 PHEXP78562 749 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 TNFRSF17Q02223 184 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 PCDH1Q08174 1060 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 CALCOCO2Q13137 446 aa17.27■□□□□ 0.36
CAB39-203ENST00000410084 SNTB1Q13884 538 aaKnown RBP17.27■□□□□ 0.36
CAB39-203ENST00000410084 ZNF267Q14586 743 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms