RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SDCBP2Q9H190 292 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 KAT8Q9H7Z6 458 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SRA1Q9HD15 236 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 PEX16Q9Y5Y5 336 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ACOX3O15254 700 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 PTPRCAPQ14761 206 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.686e-9■■■■■ 38.4
PRPF40A-202ENST00000410080 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 TRIM46Q7Z4K8 759 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 TRIB2Q92519 343 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 GCM1Q9NP62 436 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RNF11Q9Y3C5 154 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 LOC730098B7Z3J9 87 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 H3BQ06 376 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 APOL3O95236 402 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF30P17039 623 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CD9P21926 228 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC6A4P31645 630 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 NPTX1Q15818 432 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 FUKQ8N0W3 1084 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC22A4Q9H015 551 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RGCCQ9H4X1 137 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 NAALAD2Q9Y3Q0 740 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CYB5BO43169 146 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 LILRB5O75023 590 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RFPL2O75678 378 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 AKR1C4P17516 323 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 STK19P49842 368 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SPTSSAQ969W0 71 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 COPZ2Q9P299 210 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 C2CD4BA6NLJ0 364 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 TSFMP43897 325 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ERVK-8P63133 956 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 PDSS2Q86YH6 399 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 FAM3CQ92520 227 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 FOXJ1Q92949 421 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 FUBP3Q96I24 572 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 RANBP3Q9H6Z4 567 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 COQ10BQ9H8M1 238 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 LATO43561 262 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SIX3O95343 332 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 GSTT2P0CG29 244 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 GLYATL1Q969I3 302 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 NXF5Q9H1B4 397 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 SVILO95425 2214 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 GSTM3P21266 225 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 PTGS2P35354 604 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF136P52737 540 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 DHCR24Q15392 516 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 ASTE1Q2TB18 679 aaPredicted RBP10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC36A4Q6YBV0 504 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 CFAP77Q6ZQR2 320 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 OR56B2PQ8NGI1 322 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 RAB8BQ92930 207 aa10.77□□□□□ -0.68
PRPF40A-202ENST00000410080 IGLV3-22A0A075B6J6 115 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 CER1O95813 267 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 SNHG28P0DPA3 235 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 GPR33Q49SQ1 333 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 GPRC6AQ5T6X5 926 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 SLX4IPQ5VYV7 408 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 FIGNL1Q6PIW4 674 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 LILRB2Q8N423 598 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 OR4K1Q8NGD4 311 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 OR56A3Q8NH54 315 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF296Q8WUU4 475 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 C7orf34Q96L11 122 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 PTRH2Q9Y3E5 179 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 CMAHPQ9Y471 501 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 LRRC10BA6NIK2 292 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 MAS1P04201 325 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 DLSTP36957 453 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 RPA4Q13156 261 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 GAS6Q14393 721 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 TSSK6Q9BXA6 273 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 TBCCD1Q9NVR7 557 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 SARDHQ9UL12 918 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 HS3ST4Q9Y661 456 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 BCL9LQ86UU0 1499 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 LOC100130705A0A1B0GUX0 176 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF99A8MXY4 864 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 NPHS1O60500 1241 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 OLIG2Q13516 323 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 NRROSQ86YC3 692 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 CLDN19Q8N6F1 224 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 OR5B12Q96R08 314 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 EFCAB11Q9BUY7 163 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 PCDHAC1Q9H158 963 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 RXFP3Q9NSD7 469 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 SUSD2Q9UGT4 822 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 CLEC4EQ9ULY5 219 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
PRPF40A-202ENST00000410080 CKAP5Q14008 2032 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms