RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 WDR36Q8NI36 951 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 TANKQ92844 425 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SLC25A36Q96CQ1 311 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 C11orf24Q96F05 449 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 OR1F2PQ96R84 312 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 OMDQ99983 421 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 KAT8Q9H7Z6 458 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 ELOVL3Q9HB03 270 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SGK2Q9HBY8 427 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TCF7L2Q9NQB0 619 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 UTP6Q9NYH9 597 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 OR6C2Q9NZP2 312 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ONECUT1Q9UBC0 465 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZMAT5Q9UDW3 170 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 SEC14L3Q9UDX4 400 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SIX4Q9UIU6 781 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SLC7A7Q9UM01 511 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 LRP12Q9Y561 859 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CARMIL1Q5VZK9 1371 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 TRBV5-5A0A0J9YX44 114 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SMIM35A0A1B0GVV1 85 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 METTL21EPA6NDL7 271 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 MEI4A8MW99 385 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 ZSCAN12O43309 604 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 RGS14O43566 566 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 OR1F1O43749 312 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SLC28A2O43868 658 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PRKRAO75569 313 aaKnown RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 CLDN14O95500 239 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 LATS1O95835 1130 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 MT-ND2P03891 347 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PABPC4LP0CB38 370 aaKnown RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 RALBP11234 206 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CYP19A1P11511 503 aaPredicted RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 CPN1P15169 458 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 AMD1P17707 334 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 MX1P20591 662 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CA4P22748 312 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 LHCGRP22888 699 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SYKP43405 635 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 B3GALT5-AS1P59052 145 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SRSF1Q07955 248 aaKnown RBP eCLIP4.42□□□□□ -1.7
LSM5-205ENST00000409952 DOC2AQ14183 400 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PTGR1Q14914 329 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CAMK4Q16566 473 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CALCRLQ16602 461 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PCK2Q16822 640 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 ACSF3Q4G176 576 aaPredicted RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 LINC01620Q4KN68 170 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CEP78Q5JTW2 689 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PLPP4Q5VZY2 271 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 GFRALQ6UXV0 394 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PIWIL4Q7Z3Z4 852 aaKnown RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 ECHDC2Q86YB7 292 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 VSTM4Q8IW00 320 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 ODF3L1Q8IXM7 274 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 EFCAB13Q8IY85 973 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 SYT14Q8NB59 555 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 DRAXINQ8NBI3 349 aaPredicted RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 OR5AU1Q8NGC0 362 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 TCP11Q8WWU5 503 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 HSD17B8Q92506 261 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 DPF1Q92782 380 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SLC35C1Q96A29 364 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 C4orf45Q96LM5 186 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 LAT2Q9GZY6 243 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 WWP1Q9H0M0 922 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 APOBEC3GQ9HC16 384 aaKnown RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 ADARB2Q9NS39 739 aaKnown RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 ZNF224Q9NZL3 707 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SUN2Q9UH99 717 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PILRBQ9UKJ0 227 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 SATB2Q9UPW6 733 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 RIPK3Q9Y572 518 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 R4GN57 208 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 COL3A1P02461 1466 aaPredicted RBP4.42□□□□□ -1.7
LSM5-205ENST00000409952 RNF123Q5XPI4 1314 aa4.42□□□□□ -1.7
LSM5-205ENST00000409952 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 HEATR9A2RTY3 570 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 TCP11X1B4DZS4 312 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 E5RJQ4 531 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 H3BTX0 84 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 ADAM10O14672 748 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 POLR2DO15514 142 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 MLNRO43193 412 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 HPRP00739 348 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 ITGA2P17301 1181 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms