RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ATG4BQ9Y4P1 393 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 PKDREJQ9NTG1 2253 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 PDZD2O15018 2839 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 A0A0G2JMM0 328 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 IQANK1A0A1B0GTG1 560 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 A0A1W2PPB8 328 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 A0A1W2PRS3 328 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 HMX2A2RU54 273 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 KIR3DP1A8MWS1 328 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 FOXE1O00358 373 aaPredicted RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 PROM1O43490 865 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 IGHG3P01860 377 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 NR2F6P10588 404 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 ARL1P40616 181 aaPredicted RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 KIR3DL1P43629 444 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
CBX3-203ENST00000409747 HYAL4Q2M3T9 481 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 C10orf62Q5T681 223 aaPredicted RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 C18orf63Q68DL7 685 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 C9orf40Q8IXQ3 194 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 RNF175Q8N4F7 328 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 L3MBTL4Q8NA19 623 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 SMC6Q96SB8 1091 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 ENKD1Q9H0I2 346 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 VPS11Q9H270 941 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 DDX31Q9H8H2 851 aaKnown RBP13.63□□□□□ -0.23
CBX3-203ENST00000409747 IKBKGQ9Y6K9 419 aa13.63□□□□□ -0.23
CBX3-203ENST00000409747 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 OR6C76A6NM76 312 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 G3V3Y1 287 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 SEMA3DO95025 777 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 CLDN9O95484 217 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 GPR75O95800 540 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 INHBAP08476 426 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 RBP1P09455 135 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 FAM58BPP0C7Q3 252 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 GALNSP34059 522 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 TECRLQ5HYJ1 363 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 RNF111Q6ZNA4 994 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 RELL1Q8IUW5 271 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 ZNF295-AS1Q8N0V1 137 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 MARVELD2Q8N4S9 558 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 TMEM251Q8N6I4 163 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 OR5M3Q8NGP4 307 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 RIT1Q92963 219 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 ATP6V1E2Q96A05 226 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 PPWD1Q96BP3 646 aaKnown RBP13.62□□□□□ -0.23
CBX3-203ENST00000409747 SPACA9Q96E40 222 aaPredicted RBP13.62□□□□□ -0.23
CBX3-203ENST00000409747 SERPINI1Q99574 410 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 LRRC1Q9BTT6 524 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 CNPPD1Q9BV87 410 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 NINJ2Q9NZG7 142 aa13.62□□□□□ -0.23
CBX3-203ENST00000409747 A0A1B0GVC2 190 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 NPIPA2E9PIF3 369 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 NPIPA3F8WFD2 350 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 AQP7O14520 342 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 SUSD5O60279 629 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 CCL3P10147 92 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 CAPN3P20807 821 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 BSGP35613 385 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 MAGEA5P43359 124 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 HERVK_113P63132 956 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ERVK-8P63133 956 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ZNF791Q3KP31 576 aaPredicted RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 SLC22A10Q63ZE4 541 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 OR52E8Q6IFG1 317 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 MRM1Q6IN84 353 aaKnown RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 MEX3BQ6ZN04 569 aaKnown RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 TRILQ7L0X0 811 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 LILRB4Q8NHJ6 448 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 PAQR8Q8TEZ7 354 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 GPR78Q96P69 363 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ERVK-6Q9BXR3 956 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ZNF717Q9BY31 904 aaPredicted RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 FUT8Q9BYC5 575 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 LDAHQ9H6V9 325 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 CNIH4Q9P003 139 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 BOKQ9UMX3 212 aaPredicted RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 ERVK-19Q9WJR5 959 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 RNF6Q9Y252 685 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ASB4Q9Y574 426 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 HRH3Q9Y5N1 445 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 FOXO6A8MYZ6 492 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 STX16-NPEPL1H3BU86 382 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 STX16O14662 325 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 HCN1O60741 890 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 ZNF354AO60765 605 aaPredicted RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 EEDO75530 441 aaKnown RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
CBX3-203ENST00000409747 ACVR2AP27037 513 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 SERPINB3P29508 390 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 DNASE1L1P49184 302 aa13.61□□□□□ -0.23
CBX3-203ENST00000409747 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms