RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SNX4O95219 450 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TGM1P22735 817 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TGFBR2P37173 567 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ACTR1BP42025 376 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ACTR1AP61163 376 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 SYPL1Q16563 259 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 USP43Q70EL4 1123 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ZNF566Q969W8 418 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 SNTG1Q9NSN8 517 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CELSR3Q9NYQ7 3312 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CTDSP2O14595 271 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 UPK1BO75841 260 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TIA1P31483 386 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL6A2-204ENST00000409416 SOX6P35712 828 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 BMPR1AP36894 532 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ASMTP46597 345 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 RAB25P57735 213 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CDC42P60953 191 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 KLHL12Q53G59 568 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
COL6A2-204ENST00000409416 LIPJQ5W064 366 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 FCRLBQ6BAA4 426 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 DNAJC22Q8N4W6 341 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 KBTBD8Q8NFY9 601 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CCL4L1Q8NHW4 92 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 RAD51AP1Q96B01 352 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
COL6A2-204ENST00000409416 MKLN1Q9UL63 735 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 NAALAD2Q9Y3Q0 740 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-204ENST00000409416 KIAA0513O60268 411 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 SCN2BO60939 215 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 IDSP22304 550 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 GGT2P36268 569 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 SOX3P41225 446 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 SELENOWP63302 87 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 TFF2Q03403 129 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 KCNC4Q03721 635 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 LRRC32Q14392 662 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 C9orf50Q5SZB4 431 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 VN1R5Q7Z5H4 357 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 OR52E4Q8NGH9 312 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 HRASLS5Q96KN8 279 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 C7orf34Q96L11 122 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 DMRTB1Q96MA1 342 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 HS3ST2Q9Y278 367 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 COL4A4P53420 1690 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 TLX2O43763 284 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PNLIPRP1P54315 467 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 CXCR4P61073 352 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 SIM1P81133 766 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-204ENST00000409416 TAP2Q03519 686 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 ZNF763Q0D2J5 394 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 GPR68Q15743 365 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 ATAD3BQ5T9A4 648 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 TMEM107Q6UX40 140 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 CASP12Q6UXS9 341 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 MTSS1LQ765P7 747 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 CHCHD4Q8N4Q1 142 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PARP16Q8N5Y8 322 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 HMGB4Q8WW32 186 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 COQ7Q99807 217 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 MAT2BQ9NZL9 334 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 PSORS1C1Q9UIG5 152 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 HSPE1-MOB4S4R3N1 261 aa12.73□□□□□ -0.37
COL6A2-204ENST00000409416 AGAP5A6NIR3 686 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 SSX4O60224 188 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 GREM1O60565 184 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CCNB2O95067 398 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 KRT8P05787 483 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 C1GALT1C1LP0DN25 315 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CBLP22681 906 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CNR2P34972 360 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 EIF2DP41214 584 aaKnown RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CCR4P51679 360 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CRYBA2P53672 197 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 COPZ1P61923 177 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 GGTA1PQ4G0N0 100 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DEFB134Q4QY38 66 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 KIAA1161Q6NSJ0 714 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 GALNT13Q8IUC8 556 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CELF2-AS1Q8N7Q2 184 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 OR9Q1Q8NGQ5 310 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms