RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SERPINB3P29508 390 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 GDF5P43026 501 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 CDK9P50750 372 aaKnown RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 FOXF2Q12947 444 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 PPP1R3AQ16821 1122 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 C18orf21Q32NC0 220 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 ADPRMQ3LIE5 342 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 VASNQ6EMK4 673 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 ADNP2Q6IQ32 1131 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 OR4N5Q8IXE1 308 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 DND1Q8IYX4 353 aaKnown RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 KRT78Q8N1N4 520 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 MCUQ8NE86 351 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 DIO2Q92813 273 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 ANKRD9Q96BM1 317 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
CHMP3-203ENST00000409225 WDYHV1Q96HA8 205 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 SIGLEC10Q96LC7 697 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 DGAT2Q96PD7 388 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 F2RL3Q96RI0 385 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 UGT2B28Q9BY64 529 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 CALHM2Q9HA72 323 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
CHMP3-203ENST00000409225 NPEPPSL1A6NEC2 478 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 CDC7O00311 574 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 CRLF1O75462 422 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 IGKV3-11P04433 115 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 GSTM2P28161 218 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 HPDP32754 393 aaPredicted RBP15.25■□□□□ 0.03
CHMP3-203ENST00000409225 TOMM20Q15388 145 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 EIPR1Q53HC9 387 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 BICRALQ6AI39 1079 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 DGAT2L6Q6ZPD8 337 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 LYRM4Q9HD34 91 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 PRDM7Q9NQW5 492 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 NDRG3Q9UGV2 375 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
CHMP3-203ENST00000409225 DYRK3O43781 588 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 FGF17O60258 216 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 CNOT4O95628 575 aaKnown RBP15.24■□□□□ 0.03
CHMP3-203ENST00000409225 HPNP05981 417 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 FPR1P21462 350 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 MAGEA3P43357 314 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 SLCO1A2P46721 670 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 RPL21P46778 160 aaKnown RBP15.24■□□□□ 0.03
CHMP3-203ENST00000409225 STT3AP46977 705 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 TGM3Q08188 693 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 RCAN2Q14206 197 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 CRYMQ14894 314 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 ACKR1Q16570 336 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 NTRK2Q16620 822 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 TMEM64Q6YI46 380 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 ZNF793Q6ZN11 406 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 PHC2Q8IXK0 858 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 ABTB1Q969K4 478 aaPredicted RBP15.24■□□□□ 0.03
CHMP3-203ENST00000409225 GNRHR2Q96P88 292 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 SFXN3Q9BWM7 321 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 NT5DC2Q9H857 520 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 TESMINQ9Y4I5 508 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 NPFFR2Q9Y5X5 522 aa15.24■□□□□ 0.03
CHMP3-203ENST00000409225 MXRA5Q9NR99 2828 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 RTCAO00442 366 aaKnown RBP15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SIAH2O43255 324 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 C8BP07358 591 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 CPN2P22792 545 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SOX18P35713 384 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 CPOXP36551 454 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 KCNC1P48547 511 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 MASP1P48740 699 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 ZNF75DP51815 510 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 NHSL2Q5HYW2 709 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 WIPI1Q5MNZ9 446 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-203ENST00000409225 TBCELQ5QJ74 424 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SLC29A4Q7RTT9 530 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 PPP1R14CQ8TAE6 165 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SLC44A1Q8WWI5 657 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 INTS12Q96CB8 462 aaKnown RBP15.23■□□□□ 0.03
CHMP3-203ENST00000409225 PIK3IP1Q96FE7 263 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 ART5Q96L15 291 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 RILPQ96NA2 401 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 KCNC2Q96PR1 638 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 WWTR1Q9GZV5 400 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 UBQLN3Q9H347 655 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHMP3-203ENST00000409225 C15orf41Q9Y2V0 281 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 VWA7Q9Y334 891 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 SPACA6W5XKT8 324 aa15.23■□□□□ 0.03
CHMP3-203ENST00000409225 CHD3Q12873 2000 aaKnown RBP15.22■□□□□ 0.03
CHMP3-203ENST00000409225 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ANKRD33BA6NCL7 494 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 DEFB108AA8MXU0 73 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 TP53I11O14683 189 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 CYP4B1P13584 511 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 NID1P14543 1247 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 PGAM1P18669 254 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ATP5A1P25705 553 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms