RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 B3GNT4Q9C0J1 378 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PNPLA3Q9NST1 481 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ING3Q9NXR8 418 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DNAJB9Q9UBS3 223 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PADI1Q9ULC6 663 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 COLQQ9Y215 455 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 THSD7AQ9UPZ6 1657 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SRRM3A6NNA2 597 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 FOXO6A8MYZ6 492 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MBTPS2O43462 519 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PSIP1O75475 530 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SPARCP09486 303 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UGT2B7P16662 529 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MSX2P35548 267 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CCR5P51681 352 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CDKN2DP55273 166 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TPRG1LQ5T0D9 272 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 GRHL2Q6ISB3 625 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 C1orf210Q8IVY1 113 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC44A3Q8N4M1 653 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 AMER2Q8N7J2 671 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DTWD2Q8NBA8 298 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR52P1PQ8NH57 321 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RAB8BQ92930 207 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CGREF1Q99674 301 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UCK2Q9BZX2 261 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MEAF6Q9HAF1 191 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ENY2Q9NPA8 101 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 WBP11Q9Y2W2 641 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FOXE1O00358 373 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TNFSF15O95150 251 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ATE1O95260 518 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 H2BFMP0C1H6 154 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PGAM2P15259 253 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SDC2P34741 201 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 GGT2P36268 569 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DLSTP36957 453 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SLC15A1P46059 708 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HK3P52790 923 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TIFABQ6ZNK6 161 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PRR22Q8IZ63 422 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LGI4Q8N135 537 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FAM160A2Q8N612 972 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR2A12Q8NGT7 310 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR14A16Q8NHC5 309 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 RHEBL1Q8TAI7 183 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 COX4I2Q96KJ9 171 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OR5B2Q96R09 309 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SMURF1Q9HCE7 757 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 IL26Q9NPH9 171 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PDE10AQ9Y233 779 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LOXL2Q9Y4K0 774 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SCAMP2O15127 329 aaKnown RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SRPX2O60687 465 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SHOX2O60902 331 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 INMTO95050 263 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SLC5A2P31639 672 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SLC6A8P48029 635 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DIO3P55073 304 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TSPAN5P62079 268 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ARF5P84085 180 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SCN1BQ07699 218 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ARHGAP19Q14CB8 494 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MLC1Q15049 377 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TIGD6Q17RP2 521 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SLC5A9Q2M3M2 681 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CTC1Q2NKJ3 1217 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ATG9BQ674R7 924 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FIGNL1Q6PIW4 674 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PAMR1Q6UXH9 720 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LINC00696Q6ZRV3 163 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LAPTM4BQ86VI4 370 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FTMTQ8N4E7 242 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CREB3L4Q8TEY5 395 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ZUFSPQ96AP4 578 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FAM122AQ96E09 287 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 OMA1Q96E52 524 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 DNAJA3Q96EY1 480 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HS6ST2Q96MM7 605 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ANKRD27Q96NW4 1050 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 INSM2Q96T92 566 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CRISPLD2Q9H0B8 497 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 CD248Q9HCU0 757 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 MARCH4Q9P2E8 410 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 LHX3Q9UBR4 397 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ZDHHC2Q9UIJ5 367 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM184BQ9Y519 407 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-203ENST00000409101 SPO11Q9Y5K1 396 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 FKBP7Q9Y680 259 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 TJP1Q07157 1748 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 ISPDA4D126 451 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 KLRC4-KLRK1H3BQV0 150 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 HAT1O14929 419 aa4.78□□□□□ -1.64
SCN3A-203ENST00000409101 PGRP06401 933 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms