RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DUSP12Q9UNI6 340 aa23.32■■□□□ 1.32
DNMT3A-206ENST00000406659 SH3GLB1Q9Y371 365 aa23.32■■□□□ 1.32
DNMT3A-206ENST00000406659 FAM32AQ9Y421 112 aaKnown RBP23.32■■□□□ 1.32
DNMT3A-206ENST00000406659 SLC28A2O43868 658 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 C8orf89P0DMQ9 161 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 OR12D1P0DN82 309 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 MATN1P21941 496 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 FEN1P39748 380 aaKnown RBP23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 PEX19P40855 299 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 RPS6KA3P51812 740 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 C1orf61Q13536 156 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 MEP1AQ16819 746 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF750Q32MQ0 723 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 C6orf141Q5SZD1 244 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 BHLHB9Q6PI77 547 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 TMEM64Q6YI46 380 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 CHDHQ8NE62 594 aaPredicted RBP23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 GIPC3Q8TF64 312 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 NCSTNQ92542 709 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 NMD3Q96D46 503 aaKnown RBP23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 CNRIP1Q96F85 164 aaPredicted RBP23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 EXD2Q9NVH0 621 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 HRASLS2Q9NWW9 162 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 MRPS17Q9Y2R5 130 aaKnown RBP23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 LYVE1Q9Y5Y7 322 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF780BQ9Y6R6 833 aa23.31■■□□□ 1.32
DNMT3A-206ENST00000406659 IGHV1OR15-9A0A0B4J2B8 117 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 H3BSA7 217 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 NR2F6P10588 404 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 RYKP34925 604 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 MPIP34949 423 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 ANXA11P50995 505 aaKnown RBP23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 PRKAG1P54619 331 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 CD47Q08722 323 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 TOP3AQ13472 1001 aaPredicted RBP23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 SIM2Q14190 667 aaPredicted RBP23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 GAS6Q14393 721 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 UBXN2BQ14CS0 331 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 SUZ12Q15022 739 aaKnown RBP23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 DGLUCYQ7Z3D6 616 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 TTC29Q8NA56 475 aaPredicted RBP23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 CAMKVQ8NCB2 501 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 SETD9Q8NE22 299 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 XAGE5Q8WWM1 108 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 SLC6A18Q96N87 628 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF607Q96SK3 696 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 SERHL2Q9H4I8 314 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 P2RX2Q9UBL9 471 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 PILRAQ9UKJ1 303 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 CEPT1Q9Y6K0 416 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 COMMD3-BMI1R4GMX3 469 aa23.3■■□□□ 1.32
DNMT3A-206ENST00000406659 PRAMEF25A6NGN4 478 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 DNAJB5O75953 348 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 CYP4B1P13584 511 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ETS2P15036 469 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 IL7RP16871 459 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 MAGEA8P43361 318 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 KHKP50053 298 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ISL1P61371 349 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 GPR141Q7Z602 305 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 PARGQ86W56 976 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 SFTPA2Q8IWL1 248 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 SUN3Q8TAQ9 357 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ZCCHC10Q8TBK6 192 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 MOAP1Q96BY2 351 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 PIP5K1AQ99755 562 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ZFYVE21Q9BQ24 234 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF451Q9Y4E5 1061 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ENPP4Q9Y6X5 453 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 P2RX6O15547 441 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 NDUFS2O75306 463 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 IFNW1P05000 195 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ALPPL2P10696 532 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 CDH12P55289 794 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 DUSP7Q16829 419 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 CTU2Q2VPK5 515 aaKnown RBP23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ZNF773Q6PK81 442 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 FAM46DQ8NEK8 389 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 OR56A1Q8NGH5 318 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 RERGQ96A58 199 aaPredicted RBP23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 SERINC2Q96SA4 455 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 ORAI3Q9BRQ5 295 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 PHF11Q9UIL8 331 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 BLOC1S6Q9UL45 172 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 KLK4Q9Y5K2 254 aa23.29■■□□□ 1.32
DNMT3A-206ENST00000406659 A0A0J9YY10 115 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 B4GAT1O43505 415 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 MFN2O95140 757 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 SMIM10L1P0DMW3 83 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 NR2F1P10589 423 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 JUNDP17535 347 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 CRHBPP24387 322 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 PTGER1P34995 402 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 BUD31P41223 144 aaPredicted RBP23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 XCR1P46094 333 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 IL5RAQ01344 420 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 KCNC4Q03721 635 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 RELAQ04206 551 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 DUSP2Q05923 314 aa23.28■■□□□ 1.32
DNMT3A-206ENST00000406659 RAPSNQ13702 412 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms