RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CA5BP1Q8WTZ4 195 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 WDFY2Q96P53 400 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 TREM1Q9NP99 234 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 PCTPQ9UKL6 214 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 KCNMB2Q9Y691 235 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
DUSP28-202ENST00000405954 ARID1AO14497 2285 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 NIPSNAP2O75323 286 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MTHFD2P13995 350 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 POU3F2P20265 443 aaPredicted RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RPL9P32969 192 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZXDBP98169 803 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 SLITRK4Q8IW52 837 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 CLDN22Q8N7P3 220 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 OR2T4Q8NH00 348 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 OR6S1Q8NH40 331 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 TM9SF4Q92544 642 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 H2AFJQ9BTM1 129 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 UFSP2Q9NUQ7 469 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 D6RAR5 112 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RNGTTO60942 597 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 F9P00740 461 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 EPOP01588 193 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RNF224P0DH78 156 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 S100PP25815 95 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ALDH9A1P49189 494 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 SLC16A1P53985 500 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 CD276Q5ZPR3 534 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 LYPD4Q6UWN0 246 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 PLEKHH3Q7Z736 793 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 KAT2AQ92830 837 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ELP4Q96EB1 424 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MTG2Q9H4K7 406 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZFP64Q9NPA5 681 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 B3GAT2Q9NPZ5 323 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 TLR8Q9NR97 1041 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 KLK14Q9P0G3 267 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 NDRG3Q9UGV2 375 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RAI2Q9Y5P3 530 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MAFBQ9Y5Q3 323 aaPredicted RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZNF638Q14966 1978 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ARID2Q68CP9 1835 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZNF879B4DU55 563 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 GPR171O14626 319 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 LRRTM2O43300 516 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MT-ND4P03905 459 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 MMP12P39900 470 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RPS25P62851 125 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 HEPACAMQ14CZ8 416 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RAET1GQ6H3X3 334 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 TRMT11Q7Z4G4 463 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 OR10K1Q8NGX5 313 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ATOH8Q96SQ7 321 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 PKP4Q99569 1192 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 KATNB1Q9BVA0 655 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 PLCXD1Q9NUJ7 323 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
DUSP28-202ENST00000405954 SLC6A5Q9Y345 797 aa13.4□□□□□ -0.26
DUSP28-202ENST00000405954 FER1L6Q2WGJ9 1857 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 UBE2QL1A1L167 161 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 WNT9AO14904 365 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 CD63P08962 238 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 FGD2Q7Z6J4 655 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 KCT2Q8NC54 265 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 EEF1AKMT1Q8WVE0 214 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 SSX3Q99909 188 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 OSGEPL1Q9H4B0 414 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 SLC6A13Q9NSD5 602 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 FLRT1Q9NZU1 646 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 GPN3Q9UHW5 284 aaPredicted RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 RRN3P2A6NIE6 340 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 C5orf58C9J3I9 102 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 SMAD9O15198 467 aaKnown RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 OIP5O43482 229 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 CACNG3O60359 315 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 TPST2O60704 377 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF14P17017 642 aaPredicted RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 BTG1P62324 171 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 NFKB2Q00653 900 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 STX4Q12846 297 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 GK2Q14410 553 aaPredicted RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 KIAA0319Q5VV43 1072 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 TFAP2EQ6VUC0 442 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
DUSP28-202ENST00000405954 ISG20Q96AZ6 181 aaKnown RBP13.39□□□□□ -0.27
DUSP28-202ENST00000405954 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms