RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 HCRTR1O43613 425 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 CSNK2A2P19784 350 aaPredicted RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 PSMA4P25789 261 aaKnown RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 SLC7A1P30825 629 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 ILKQ13418 452 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 RUNX2Q13950 521 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 GRM7Q14831 915 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 CLPPQ16740 277 aaPredicted RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 TMEM71Q6P5X7 295 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 USP53Q70EK8 1073 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 SPPL2CQ8IUH8 684 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 ARHGEF39Q8N4T4 335 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 TTC29Q8NA56 475 aaPredicted RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 OR52E4Q8NGH9 312 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 OR52N2Q8NGI0 321 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 KLHL6Q8WZ60 621 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 AMDHD1Q96NU7 426 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 ENAMQ9NRM1 1142 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 SEMA3GQ9NS98 782 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 C6orf203Q9P0P8 240 aaPredicted RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 MRPS2Q9Y399 296 aaKnown RBP19.81■□□□□ 0.76
TPM1-208ENST00000404484 RNF103-CHMP3A0A140T963 221 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 DHRS12A0PJE2 317 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 FITM1A5D6W6 292 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 GLOD5A6NK44 160 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 H3BNX3 289 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 PGRMC2O15173 223 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 ERAL1O75616 437 aaKnown RBP19.8■□□□□ 0.76
TPM1-208ENST00000404484 MSL3P1P0C860 447 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 MPIP34949 423 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 NCBP2P52298 156 aaKnown RBP eCLIP19.8■□□□□ 0.76
TPM1-208ENST00000404484 CLDN6P56747 220 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 CFHR1Q03591 330 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 ANGPTL8Q6UXH0 198 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 TMPRSS7Q7RTY8 843 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 MARCH9Q86YJ5 346 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 D2HGDHQ8N465 521 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 ADAMTS18Q8TE60 1221 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 SLC41A2Q96JW4 573 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 RPF2Q9H7B2 306 aaKnown RBP19.8■□□□□ 0.76
TPM1-208ENST00000404484 STARD5Q9NSY2 213 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 USP22Q9UPT9 525 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 SNX8Q9Y5X2 465 aa19.8■□□□□ 0.76
TPM1-208ENST00000404484 NUP214P35658 2090 aaPredicted RBP19.8■□□□□ 0.76
TPM1-208ENST00000404484 HYKKA2RU49 373 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 CXCR6O00574 342 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 PRKRAO75569 313 aaKnown RBP19.79■□□□□ 0.76
TPM1-208ENST00000404484 CPNE6O95741 557 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 NTRK1P04629 796 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 CDK4P11802 303 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 NCK1P16333 377 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 GPC1P35052 558 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 GCKP35557 465 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 HSPB3Q12988 150 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 RGNQ15493 299 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 CEBPEQ15744 281 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 SPDYE7PQ495Y7 208 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 ZNF551Q7Z340 670 aaPredicted RBP19.79■□□□□ 0.76
TPM1-208ENST00000404484 PDSS2Q86YH6 399 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 PNPT1Q8TCS8 783 aaKnown RBP19.79■□□□□ 0.76
TPM1-208ENST00000404484 FIG4Q92562 907 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 NCLNQ969V3 563 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 MOAP1Q96BY2 351 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 DPH2Q9BQC3 489 aaPredicted RBP19.79■□□□□ 0.76
TPM1-208ENST00000404484 GLIPR2Q9H4G4 154 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 ZNF768Q9H5H4 540 aaKnown RBP19.79■□□□□ 0.76
TPM1-208ENST00000404484 CXorf36Q9H7Y0 433 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 MSRB2Q9Y3D2 182 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 AP4S1Q9Y587 144 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 PTPRBP23467 1997 aa19.79■□□□□ 0.76
TPM1-208ENST00000404484 BLACEA4D250 179 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 ZNF860A6NHJ4 632 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 NSA2O95478 260 aaKnown RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 HOXB6P17509 224 aaKnown RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 IL10P22301 178 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 MAGEA8P43361 318 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 SEPHS1P49903 392 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 RAB38P57729 211 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 SESN3P58005 492 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 VMACQ2NL98 169 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 BHLHB9Q6PI77 547 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 TMEM64Q6YI46 380 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 CA13Q8N1Q1 262 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 PQLC1Q8N2U9 271 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 OR4K14Q8NGD5 310 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 IFI44Q8TCB0 444 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 SFXN5Q8TD22 340 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 NEURL3Q96EH8 262 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 CNRIP1Q96F85 164 aaPredicted RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 FANCEQ9HB96 536 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 CCM2LQ9NUG4 571 aaPredicted RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 CLCA2Q9UQC9 943 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 WDFY3Q8IZQ1 3526 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 FAM149AA5PLN7 773 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 ANKRD34CP0C6C1 535 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 NELFEP18615 380 aaKnown RBP19.78■□□□□ 0.76
TPM1-208ENST00000404484 SOX11P35716 441 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 AVPR1BP47901 424 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 E2F1Q01094 437 aa19.78■□□□□ 0.76
TPM1-208ENST00000404484 RBBP4Q09028 425 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms