RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HRKO00198 91 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 WWP2O00308 870 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 DLX3O60479 287 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 UGDHO60701 494 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ITGA10O75578 1167 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC25A12O75746 678 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZFAND5O76080 213 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR4F21O95013 312 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 UNC5CO95185 931 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 AIFM1O95831 613 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 DDAH2O95865 285 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 LDLRP01130 860 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SP1P08047 785 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PTX3P26022 381 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 RFC3P40938 356 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 CYB561P49447 251 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 HLCSP50747 726 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PSMA6P60900 246 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PHEXP78562 749 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 HSF1Q00613 529 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TNFRSF17Q02223 184 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 FOLH1Q04609 750 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 RCN2Q14257 317 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TERF2Q15554 542 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ELAVL1Q15717 326 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 INAQ16352 499 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 UNC50Q53HI1 259 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TBCELQ5QJ74 424 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 XP32Q5T750 250 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 LGSNQ5TDP6 509 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 FRG2Q64ET8 278 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TTC19Q6DKK2 380 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC25A25Q6KCM7 469 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 LETMD1Q6P1Q0 360 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 CYP20A1Q6UW02 462 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TIFABQ6ZNK6 161 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MDGA2Q7Z553 956 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SYT9Q86SS6 491 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 GPR180Q86V85 440 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 FJX1Q86VR8 437 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MMP21Q8N119 569 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 LGI4Q8N135 537 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM132CQ8N3T6 1108 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZCCHC7Q8N3Z6 543 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 CPSF7Q8N684 471 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC2A12Q8TD20 617 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRPC4APQ8TEL6 797 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MZB1Q8WU39 189 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 UBLCP1Q8WVY7 318 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 REPS1Q96D71 796 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 VMP1Q96GC9 406 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SCMH1Q96GD3 660 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 FRMD6Q96NE9 622 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM237Q96Q45 408 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 FRG2BQ96QU4 278 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 NTMT1Q9BV86 223 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 MRPL1Q9BYD6 325 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 C12orf65Q9H3J6 166 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 RPF2Q9H7B2 306 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 L2HGDHQ9H9P8 463 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TEX10Q9NXF1 929 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PSMC3IPQ9P2W1 217 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SEC14L3Q9UDX4 400 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 VTI1BQ9UEU0 232 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ADGRE2Q9UHX3 823 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SH3BGRL2Q9UJC5 107 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF225Q9UK10 706 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 EMCNQ9ULC0 261 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMCO1Q9UM00 188 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PPIEQ9UNP9 301 aaKnown RBP5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF232Q9UNY5 417 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC5A6Q9Y289 635 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 TSC22D4Q9Y3Q8 395 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 ASB4Q9Y574 426 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 CLCA3PQ9Y6N3 262 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 SPACA6W5XKT8 324 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 CACNA1DQ01668 2161 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 LRBAP50851 2863 aa5.36□□□□□ -1.55
HMGB1P20-201ENST00000402555 PKDREJQ9NTG1 2253 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRGV8A0A0C4DH27 118 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A0G2JMM0 328 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A1W2PPB8 328 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A1W2PRS3 328 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ASPDHA6ND91 283 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 KIR3DP1A8MWS1 328 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NPIPA5E9PKD4 350 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 G3V3Y1 287 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 FOXE1O00358 373 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 FCHO1O14526 889 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PGRMC2O15173 223 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PROM1O43490 865 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NME2P1O60361 137 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF354AO60765 605 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZG16O60844 167 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR2J2O76002 312 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SUPT7LO94864 414 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR6B1O95007 311 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CLDN1O95832 211 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms