RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SNX3O60493 162 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 FEN1P39748 380 aaKnown RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 XKP51811 444 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 ACTN3Q08043 901 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 STX4Q12846 297 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PDE7AQ13946 482 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 LRRC69Q6ZNQ3 347 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 DGAT2L6Q6ZPD8 337 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PIGWQ7Z7B1 504 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 OR11G2Q8NGC1 345 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 OR4K14Q8NGD5 310 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 EXOSC8Q96B26 276 aaKnown RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 WDR77Q9BQA1 342 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 SDR39U1Q9NRG7 319 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-204ENST00000401473 BSNQ9UPA5 3926 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 LOC102723996A0A087X1L8 192 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 C9JVG2 144 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PRKAR1AP10644 381 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 IDO1P14902 403 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PRPS1L1P21108 318 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 ST3GAL2Q16842 350 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 METTL21AQ8WXB1 218 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 NACC2Q96BF6 587 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 CCT8L2Q96SF2 557 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 MIEF1Q9NQG6 463 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 SLC35C2Q9NQQ7 365 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 SH3BP4Q9P0V3 963 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 PSME2Q9UL46 239 aa14.93□□□□□ -0.02
HMGA1-204ENST00000401473 CACNA1BQ00975 2339 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 SCAMP2O15127 329 aaKnown RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CYC1P08574 325 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 LAMP1P11279 417 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 NCF2P19878 526 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 GPX3P22352 226 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 PIK3R1P27986 724 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 PTGER1P34995 402 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 SOX18P35713 384 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 ZFP36L2P47974 494 aaKnown RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 C21orf58P58505 322 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CEBPEQ15744 281 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 GSTA3Q16772 222 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CCDC81Q6ZN84 652 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 SPATA21Q7Z572 469 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CPEB2Q7Z5Q1 589 aaKnown RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CCDC116Q8IYX3 515 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 DOK4Q8TEW6 326 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 CIDECQ96AQ7 238 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 DPY30Q9C005 99 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 SLAMF7Q9NQ25 335 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 P4HTMQ9NXG6 502 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 ATP6V1HQ9UI12 483 aa14.92□□□□□ -0.02
HMGA1-204ENST00000401473 COPG1Q9Y678 874 aaKnown RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 PRRC2CQ9Y520 2896 aaKnown RBP14.92□□□□□ -0.02
HMGA1-204ENST00000401473 A8MUA0 341 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PHC1P78364 1004 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 RPS6KA2Q15349 733 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 SFT2D3Q587I9 215 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 METTL21CQ5VZV1 264 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PAOXQ6QHF9 649 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 MRGPREQ86SM8 312 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 SUN3Q8TAQ9 357 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PTPMT1Q8WUK0 201 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 COQ8BQ96D53 544 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ZNF385DQ9H6B1 395 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PNO1Q9NRX1 252 aaKnown RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ZFYVE26Q68DK2 2539 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 IGHV1-45A0A0A0MS14 117 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 K7ENP7 123 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 TBX19O60806 448 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 IGHEP01854 428 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 SLC35E2P0CK97 266 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 COX6A1P12074 109 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 CPMP14384 443 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PORP16435 677 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 OR4D2P58180 307 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 EEF1A2Q05639 463 aaKnown RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ATP1A4Q13733 1029 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 SERTAD2Q14140 314 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PCOLCEQ15113 449 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PDCD4Q53EL6 469 aaKnown RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 CRTC2Q53ET0 693 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 CPZQ66K79 652 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 INO80CQ6PI98 192 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 FUNDC1Q8IVP5 155 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ST13P4Q8IZP2 240 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 PPCDCQ96CD2 204 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 MTERF3Q96E29 417 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 RBM18Q96H35 190 aaKnown RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ZNF764Q96H86 408 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-204ENST00000401473 CLMPQ9H6B4 373 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 ERVK-11Q9UQG0 969 aa14.91□□□□□ -0.02
HMGA1-204ENST00000401473 A0A1W2PQ72 361 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 CDC14CA4D256 554 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 HRKO00198 91 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 SLC22A3O75751 556 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 SEC24DO94855 1032 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-204ENST00000401473 IFNA16P05015 189 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms