RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 KRT6BP04259 564 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 ZCCHC18P0CG32 403 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 CALCBP10092 127 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 EPB41P11171 864 aaKnown RBP3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 RALAP11233 206 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 ODC1P11926 461 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 GP1BBP13224 206 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 GNSP15586 552 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 CYP3A5P20815 502 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 KRT6CP48668 564 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 GEMP55040 296 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 NFATC2Q13469 925 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 TRIM29Q14134 588 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 BTG3Q14201 252 aaPredicted RBP3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 TMEM132DQ14C87 1099 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 EFTUD2Q15029 972 aaKnown RBP eCLIP3.69□□□□□ -1.827e-7■■□□□ 13.3
SAMSN1-202ENST00000400564 CEP55Q53EZ4 464 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 NKAIN2Q5VXU1 208 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 C17orf107Q6ZR85 190 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 ADGRD2Q7Z7M1 963 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 MISPQ8IVT2 679 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 AQP11Q8NBQ7 271 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 FAM71CQ8NEG0 241 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 OR7A2PQ8NGA2 310 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 C11orf45Q8TAV5 145 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 PIK3R3Q92569 461 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 GLYATL1Q969I3 302 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 CCDC51Q96ER9 411 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 FAM218AQ96MZ4 157 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 LPAR4Q99677 370 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 LRRC61Q9BV99 259 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 MTMR12Q9C0I1 747 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 NT5C3AQ9H0P0 336 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 MARCH7Q9H992 704 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 VAT1LQ9HCJ6 419 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 ACOXLQ9NUZ1 547 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 MAN1B1Q9UKM7 699 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 ETV7Q9Y603 341 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 CSNK1G3Q9Y6M4 447 aa3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 COL2A1P02458 1487 aaPredicted RBP3.69□□□□□ -1.82
SAMSN1-202ENST00000400564 NCAPD2Q15021 1401 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 ADAM12O43184 909 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 IDH3BO43837 385 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 LRP3O75074 770 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 VPS26AO75436 327 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SNX4O95219 450 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SYNGR4O95473 234 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 EPOP01588 193 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 ATP1B1P05026 303 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 YES1P07947 543 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 CD59P13987 128 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GATA1P15976 413 aaPredicted RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 RPL35AP18077 110 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 PAICSP22234 425 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GATA2P23769 480 aaPredicted RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SLC1A3P43003 542 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 TNFRSF4P43489 277 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 CLCN4P51793 760 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GBX2P52951 348 aaPredicted RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 NLRP11P59045 1033 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 ACTR1AP61163 376 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 HSF2Q03933 536 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 LRRC74AQ0VAA2 488 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SGCGQ13326 291 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 PDIA5Q14554 519 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SPHARQ15513 63 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GLIPR1L2Q4G1C9 344 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 LYPLAL1Q5VWZ2 237 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 OR4C11Q6IEV9 310 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 DHRS11Q6UWP2 260 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 CPEB2Q7Z5Q1 589 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 C5orf24Q7Z6I8 188 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 LRRC17Q8N6Y2 441 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 TMEM99Q8N816 258 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 Q8NBF4 154 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 PRSS33Q8NF86 280 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 DQX1Q8TE96 717 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GTF3AQ92664 365 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 NXPE2Q96DL1 559 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 BPIFA2Q96DR5 249 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 PRICKLE1Q96MT3 831 aaPredicted RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 TTC25Q96NG3 672 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 CDCA3Q99618 268 aaPredicted RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 FUNDC2Q9BWH2 189 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 NMNAT2Q9BZQ4 307 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 RPS10P5Q9NQ39 176 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 FARSBQ9NSD9 589 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 DDX28Q9NUL7 540 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 EXOC1Q9NV70 894 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 MIS18AQ9NYP9 233 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 GTSE1Q9NYZ3 720 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 SMC3Q9UQE7 1217 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 MRPS2Q9Y399 296 aaKnown RBP3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 ABCC4O15439 1325 aa3.68□□□□□ -1.82
SAMSN1-202ENST00000400564 A0A1B0GWJ7 208 aa3.67□□□□□ -1.82
SAMSN1-202ENST00000400564 FAM230AA0A1W2PPH8 454 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms