RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FBXL4Q9UKA2 621 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ZNF780BQ9Y6R6 833 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 CDC14CA4D256 554 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ACOX3O15254 700 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 COQ9O75208 318 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ALPPP05187 535 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ARL1P40616 181 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 OR4D2P58180 307 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 MFAP5Q13361 173 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 DDX39BQ13838 428 aaKnown RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 VWA2Q5GFL6 755 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TCHHL1Q5QJ38 904 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 FHL5Q5TD97 284 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 FAM199XQ6PEV8 388 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 OR5L2Q8NGL0 311 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 MIPOL1Q8TD10 442 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 RNF138Q8WVD3 245 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 DYDC1Q8WWB3 177 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 DTNBP1Q96EV8 351 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 DGAT2Q96PD7 388 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 CSF3RQ99062 836 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 AKTIPQ9H8T0 292 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 NECTIN3Q9NQS3 549 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TRIM33Q9UPN9 1127 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 GPR45Q9Y5Y3 372 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 MAU2Q9Y6X3 613 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 SHOX2O60902 331 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 DDAH2O95865 285 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ZCCHC18P0CG32 403 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TROVE2P10155 538 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP16-204ENST00000399976 NTSP30990 170 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 MPIP34949 423 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TAS2R50P59544 299 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 MGAT2Q10469 447 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TGIF1Q15583 401 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 NSDHLQ15738 373 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 PRICKLE4Q2TBC4 344 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 LSM12Q3MHD2 195 aaKnown RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 LINC00303Q3SY05 128 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 RFTN2Q52LD8 501 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 SFT2D3Q587I9 215 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ZNF628Q5EBL2 1059 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 SPDYAQ5MJ70 313 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 C6orf163Q5TEZ5 329 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 ZNF721Q8TF20 911 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 PTPMT1Q8WUK0 201 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 ZBED6CLQ96FA7 236 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 PTCHD1Q96NR3 888 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 NSRP1Q9H0G5 558 aaKnown RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 CXorf21Q9HAI6 301 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 PRODH2Q9UF12 536 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 EXO1Q9UQ84 846 aaKnown RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 DLGAP4Q9Y2H0 992 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 SCN3AQ9NY46 2000 aa7.03□□□□□ -1.28
USP16-204ENST00000399976 KMT2BQ9UMN6 2715 aaPredicted RBP7.03□□□□□ -1.28
USP16-204ENST00000399976 MKRN2OSH3BPM6 223 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 FGF17O60258 216 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 DPM1O60762 260 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 NPPAP01160 153 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 CLPSP04118 112 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 IL6P05231 212 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 IL3P08700 152 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 TSPAN8P19075 237 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 MAP3K8P41279 467 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 CLCN2P51788 898 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 FOLH1Q04609 750 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 STX4Q12846 297 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 ATP1A4Q13733 1029 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 PAPD4Q6PIY7 484 aaKnown RBP7.02□□□□□ -1.28
USP16-204ENST00000399976 VASH2Q86V25 355 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 DDIASQ8IXT1 998 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 OR2L13Q8N349 312 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 SLC5A8Q8N695 610 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 EFCAB3Q8N7B9 438 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 APCDD1LQ8NCL9 501 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 TMEM52Q8NDY8 209 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 OR5P2Q8WZ92 322 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 HAS2Q92819 552 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 HSPBAP1Q96EW2 488 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 C3orf30Q96M34 536 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 LMF2Q9BU23 707 aaKnown RBP7.02□□□□□ -1.28
USP16-204ENST00000399976 ALOXE3Q9BYJ1 711 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 SOX17Q9H6I2 414 aaPredicted RBP7.02□□□□□ -1.28
USP16-204ENST00000399976 TEX10Q9NXF1 929 aaPredicted RBP7.02□□□□□ -1.28
USP16-204ENST00000399976 ABI3Q9P2A4 366 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 TEKT2Q9UIF3 430 aa7.02□□□□□ -1.28
USP16-204ENST00000399976 GNG14A0A1W2PPG7 69 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 PRAMEF2O60811 474 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 LINC00032P0C843 101 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 S1PR1P21453 382 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 RPL38P63173 70 aaKnown RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 MAT1AQ00266 395 aaKnown RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 HMGCS1Q01581 520 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 ACTN3Q08043 901 aaPredicted RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 SLC13A2Q13183 592 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 KCNAB2Q13303 367 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms