RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MRPS7Q9Y2R9 242 aaKnown RBP16.27■□□□□ 0.19
PTPRA-205ENST00000399903 OARD1Q9Y530 152 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
PTPRA-205ENST00000399903 C2orf92A0A1B0GVN3 265 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 SEMG1P04279 462 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 HMGA1P17096 107 aaKnown RBP16.26■□□□□ 0.19
PTPRA-205ENST00000399903 VSX2P58304 361 aaPredicted RBP16.26■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
PTPRA-205ENST00000399903 EXOSC2Q13868 293 aaKnown RBP16.26■□□□□ 0.19
PTPRA-205ENST00000399903 ANGPT1Q15389 498 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 KLHL22Q53GT1 634 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 MLIPQ5VWP3 458 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 TIGD3Q6B0B8 471 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 IL20RBQ6UXL0 311 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 ZBTB2Q8N680 514 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 FBXW5Q969U6 566 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 OTULINQ96BN8 352 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 TRIB3Q96RU7 358 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 TRPS1Q9UHF7 1281 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 MGAT4DA6NG13 374 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 TRIM77I1YAP6 450 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 ACRP10323 421 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 DEFB103AP81534 67 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 CHIT1Q13231 466 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 LIPIQ6XZB0 460 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 TPGS1Q6ZTW0 290 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 WDFY2Q96P53 400 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 RBCK1Q9BYM8 510 aa16.26■□□□□ 0.19
PTPRA-205ENST00000399903 POM121CA8CG34 1229 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 H7C4K7 107 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 PAHP00439 452 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 NNMTP40261 264 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 CLCN4P51793 760 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 MAP2K6P52564 334 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 SMAD3P84022 425 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 SCARB2Q14108 478 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 BOP1Q14137 746 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF655Q8N720 491 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 HJURPQ8NCD3 748 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 VPS37AQ8NEZ2 397 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 OR11H4Q8NGC9 324 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 TM9SF4Q92544 642 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 USP7Q93009 1102 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 POP5Q969H6 163 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 ART5Q96L15 291 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 SLC29A3Q9BZD2 475 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 CHIAQ9BZP6 476 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 TRPM5Q9NZQ8 1165 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 NRG2O14511 850 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 TBL1XO60907 577 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 CHI3L1P36222 383 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 ADNP2Q6IQ32 1131 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 DEF8Q6ZN54 512 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 HMGN2P46Q86SG4 172 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 LSRQ86X29 649 aaPredicted RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 SYNPOQ8N3V7 929 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 MYLIPQ8WY64 445 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 AP3S1Q92572 193 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 IGSF21Q96ID5 467 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 SPNS1Q9H2V7 528 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 CNOT2Q9NZN8 540 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 A0A1W2PRG6 482 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 TRBC2A0A5B9 178 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 OR5K3A6NET4 321 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 PRAMEF25A6NGN4 478 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 AMD1P17707 334 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 AKR1D1P51857 326 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 RHAGQ02094 409 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 CRYZQ08257 329 aaKnown RBP16.25■□□□□ 0.19
PTPRA-205ENST00000399903 MFSD13AQ14CX5 517 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 ABCG5Q9H222 651 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 PDFQ9HBH1 243 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 YIPF1Q9Y548 306 aa16.25■□□□□ 0.19
PTPRA-205ENST00000399903 TRBV4-1A0A0J9YWV2 114 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 H3BNC9 293 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SLC30A4O14863 429 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 FKTNO75072 461 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 HIST1H2AGP0C0S8 130 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ZDHHC11BP0C7U3 371 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 HIST1H2ADP20671 130 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ETV5P41161 510 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ETV1P50549 477 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CLDN20P56880 219 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 IRF8Q02556 426 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SRSF11Q05519 484 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 LHFPL3Q86UP9 236 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 METTL2AQ96IZ6 378 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 HIST1H2AHQ96KK5 128 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 HIST1H2AJQ99878 128 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 H2AFJQ9BTM1 129 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ATP6V1HQ9UI12 483 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 PADI2Q9Y2J8 665 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 GSTK1Q9Y2Q3 226 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 MYO9BQ13459 2157 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 FRMPD3Q5JV73 1810 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SAP18O00422 153 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 RAF1P04049 648 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CXCL3P19876 107 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms